RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 LRRFIP2Q9Y608 721 aaKnown RBP16.46■□□□□ 0.23
SCAP-210ENST00000468965 SRGNP10124 158 aa16.45■□□□□ 0.22
SCAP-210ENST00000468965 C2CD5Q86YS7 1000 aa16.45■□□□□ 0.22
SCAP-210ENST00000468965 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
SCAP-210ENST00000468965 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
SCAP-210ENST00000468965 A0A0G2JLW4 131 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 CSF1RP07333 972 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
SCAP-210ENST00000468965 DPEP1P16444 411 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 KCNA3P22001 575 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 TGFB2P61812 414 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 RABL6Q3YEC7 729 aaPredicted RBP16.44■□□□□ 0.22
SCAP-210ENST00000468965 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
SCAP-210ENST00000468965 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
SCAP-210ENST00000468965 GNAI2P04899 355 aa16.43■□□□□ 0.22
SCAP-210ENST00000468965 LMBR1LQ6UX01 489 aa16.43■□□□□ 0.22
SCAP-210ENST00000468965 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
SCAP-210ENST00000468965 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 RTL9Q8NET4 1388 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 H0YIN7 160 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 NEFLP07196 543 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
SCAP-210ENST00000468965 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 EXOC6Q8TAG9 804 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 MASTLQ96GX5 879 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 GREM2Q9H772 168 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
SCAP-210ENST00000468965 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
SCAP-210ENST00000468965 NPR1P16066 1061 aa16.41■□□□□ 0.22
SCAP-210ENST00000468965 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
SCAP-210ENST00000468965 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
SCAP-210ENST00000468965 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
SCAP-210ENST00000468965 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCAP-210ENST00000468965 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
SCAP-210ENST00000468965 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
SCAP-210ENST00000468965 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
SCAP-210ENST00000468965 ITGA6P23229 1130 aa16.39■□□□□ 0.21
SCAP-210ENST00000468965 MTX1Q13505 466 aa16.39■□□□□ 0.21
SCAP-210ENST00000468965 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
SCAP-210ENST00000468965 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
SCAP-210ENST00000468965 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
SCAP-210ENST00000468965 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
SCAP-210ENST00000468965 CHMP4BQ9H444 224 aaKnown RBP16.39■□□□□ 0.21
SCAP-210ENST00000468965 PNMA6EA0A0J9YXQ4 647 aa16.38■□□□□ 0.21
SCAP-210ENST00000468965 RFX5P48382 616 aaPredicted RBP16.38■□□□□ 0.21
SCAP-210ENST00000468965 GRAPQ13588 217 aa16.38■□□□□ 0.21
SCAP-210ENST00000468965 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
SCAP-210ENST00000468965 SLC51AQ86UW1 340 aa16.38■□□□□ 0.21
SCAP-210ENST00000468965 GRAPLQ8TC17 118 aaPredicted RBP16.38■□□□□ 0.21
SCAP-210ENST00000468965 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
SCAP-210ENST00000468965 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
SCAP-210ENST00000468965 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
SCAP-210ENST00000468965 PIM2Q9P1W9 311 aa16.37■□□□□ 0.21
SCAP-210ENST00000468965 ANKRD18BA2A2Z9 1011 aa16.36■□□□□ 0.21
SCAP-210ENST00000468965 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
SCAP-210ENST00000468965 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
SCAP-210ENST00000468965 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
SCAP-210ENST00000468965 ZNF594Q96JF6 807 aaPredicted RBP16.36■□□□□ 0.21
SCAP-210ENST00000468965 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
SCAP-210ENST00000468965 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
SCAP-210ENST00000468965 POLA2Q14181 598 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
SCAP-210ENST00000468965 TTLL6Q8N841 843 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
SCAP-210ENST00000468965 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
SCAP-210ENST00000468965 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
SCAP-210ENST00000468965 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
SCAP-210ENST00000468965 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
SCAP-210ENST00000468965 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
SCAP-210ENST00000468965 C7orf43Q8WVR3 580 aa16.34■□□□□ 0.21
SCAP-210ENST00000468965 PA2G4Q9UQ80 394 aaKnown RBP16.34■□□□□ 0.21
SCAP-210ENST00000468965 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
SCAP-210ENST00000468965 BBOX1O75936 387 aa16.33■□□□□ 0.2
SCAP-210ENST00000468965 AAMPQ13685 434 aa16.33■□□□□ 0.2
SCAP-210ENST00000468965 DALRD3Q5D0E6 543 aaKnown RBP16.33■□□□□ 0.2
SCAP-210ENST00000468965 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
SCAP-210ENST00000468965 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.2
SCAP-210ENST00000468965 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
SCAP-210ENST00000468965 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
SCAP-210ENST00000468965 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
SCAP-210ENST00000468965 PUS3Q9BZE2 481 aaKnown RBP16.32■□□□□ 0.2
SCAP-210ENST00000468965 COPRSQ9NQ92 184 aa16.32■□□□□ 0.2
SCAP-210ENST00000468965 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
SCAP-210ENST00000468965 BCS1LQ9Y276 419 aa16.32■□□□□ 0.2
SCAP-210ENST00000468965 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
SCAP-210ENST00000468965 TAF7LQ5H9L4 462 aa16.31■□□□□ 0.2
SCAP-210ENST00000468965 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
SCAP-210ENST00000468965 ATP6V0A2Q9Y487 856 aa16.31■□□□□ 0.2
SCAP-210ENST00000468965 SBF1O95248 1867 aa16.31■□□□□ 0.2
SCAP-210ENST00000468965 C21orf2O43822 256 aa16.3■□□□□ 0.2
SCAP-210ENST00000468965 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAP-210ENST00000468965 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
SCAP-210ENST00000468965 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms