RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 MAP2K2P36507 400 aa20.39■□□□□ 0.85
SRRM1-207ENST00000468822 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.85
SRRM1-207ENST00000468822 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
SRRM1-207ENST00000468822 TSPYL4Q9UJ04 414 aa20.39■□□□□ 0.85
SRRM1-207ENST00000468822 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 YDJCA8MPS7 323 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 NEFMP07197 916 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 NLRP10Q86W26 655 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
SRRM1-207ENST00000468822 TAF1P21675 1872 aa20.37■□□□□ 0.85
SRRM1-207ENST00000468822 BBOX1O75936 387 aa20.37■□□□□ 0.85
SRRM1-207ENST00000468822 MPNDQ8N594 471 aa20.37■□□□□ 0.85
SRRM1-207ENST00000468822 SUPT20HQ8NEM7 779 aa20.37■□□□□ 0.85
SRRM1-207ENST00000468822 RGS19P49795 217 aa20.36■□□□□ 0.85
SRRM1-207ENST00000468822 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
SRRM1-207ENST00000468822 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
SRRM1-207ENST00000468822 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
SRRM1-207ENST00000468822 ZNF408Q9H9D4 720 aa20.36■□□□□ 0.85
SRRM1-207ENST00000468822 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
SRRM1-207ENST00000468822 HHIPL1Q96JK4 782 aa20.35■□□□□ 0.85
SRRM1-207ENST00000468822 MCOLN1Q9GZU1 580 aa20.35■□□□□ 0.85
SRRM1-207ENST00000468822 ANKRD36CQ5JPF3 1778 aa20.35■□□□□ 0.85
SRRM1-207ENST00000468822 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
SRRM1-207ENST00000468822 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
SRRM1-207ENST00000468822 MLLT1Q03111 559 aaPredicted RBP20.34■□□□□ 0.85
SRRM1-207ENST00000468822 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
SRRM1-207ENST00000468822 ZC3H15Q8WU90 426 aaKnown RBP20.34■□□□□ 0.85
SRRM1-207ENST00000468822 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
SRRM1-207ENST00000468822 CNOT7Q9UIV1 285 aaKnown RBP20.34■□□□□ 0.85
SRRM1-207ENST00000468822 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
SRRM1-207ENST00000468822 COL4A1P02462 1669 aa20.34■□□□□ 0.85
SRRM1-207ENST00000468822 MAPK8IP3Q9UPT6 1336 aa20.33■□□□□ 0.85
SRRM1-207ENST00000468822 BRPF1P55201 1214 aaPredicted RBP20.33■□□□□ 0.85
SRRM1-207ENST00000468822 GRAPQ13588 217 aa20.33■□□□□ 0.85
SRRM1-207ENST00000468822 KRT24Q2M2I5 525 aa20.33■□□□□ 0.85
SRRM1-207ENST00000468822 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
SRRM1-207ENST00000468822 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
SRRM1-207ENST00000468822 EGFRP00533 1210 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 RIPK4P57078 832 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 TCIRG1Q13488 830 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 TNIP1Q15025 636 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
SRRM1-207ENST00000468822 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 MICALL2Q8IY33 904 aa20.32■□□□□ 0.84
SRRM1-207ENST00000468822 LRRC37AA6NMS7 1700 aa20.31■□□□□ 0.84
SRRM1-207ENST00000468822 CA12O43570 354 aa20.31■□□□□ 0.84
SRRM1-207ENST00000468822 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
SRRM1-207ENST00000468822 SAMD7Q7Z3H4 446 aa20.31■□□□□ 0.84
SRRM1-207ENST00000468822 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
SRRM1-207ENST00000468822 KCNQ5Q9NR82 932 aa20.3■□□□□ 0.84
SRRM1-207ENST00000468822 PSMD14O00487 310 aa20.29■□□□□ 0.84
SRRM1-207ENST00000468822 HSP90AB3PQ58FF7 597 aa20.29■□□□□ 0.84
SRRM1-207ENST00000468822 CELF1Q92879 486 aaKnown RBP20.29■□□□□ 0.84
SRRM1-207ENST00000468822 DDX60Q8IY21 1712 aaKnown RBP20.28■□□□□ 0.84
SRRM1-207ENST00000468822 HUNKP57058 714 aa20.28■□□□□ 0.84
SRRM1-207ENST00000468822 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
SRRM1-207ENST00000468822 BABAM1Q9NWV8 329 aa20.28■□□□□ 0.84
SRRM1-207ENST00000468822 RTL9Q8NET4 1388 aa20.27■□□□□ 0.84
SRRM1-207ENST00000468822 FAM155AB1AL88 458 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-207ENST00000468822 H7C1D1 291 aa20.27■□□□□ 0.84
SRRM1-207ENST00000468822 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.84
SRRM1-207ENST00000468822 DGKZQ13574 1117 aa20.27■□□□□ 0.84
SRRM1-207ENST00000468822 TBC1D10BQ4KMP7 808 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-207ENST00000468822 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.84
SRRM1-207ENST00000468822 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
SRRM1-207ENST00000468822 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
SRRM1-207ENST00000468822 ADM5C9JUS6 153 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 NOGQ13253 232 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 DPF2Q92785 391 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
SRRM1-207ENST00000468822 GPSM2P81274 684 aa20.25■□□□□ 0.83
SRRM1-207ENST00000468822 WASHC4Q2M389 1173 aa20.25■□□□□ 0.83
SRRM1-207ENST00000468822 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
SRRM1-207ENST00000468822 ATP5J2-PTCD1G3V325 749 aa20.24■□□□□ 0.83
SRRM1-207ENST00000468822 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
SRRM1-207ENST00000468822 KRT26Q7Z3Y9 468 aa20.24■□□□□ 0.83
SRRM1-207ENST00000468822 TMC4Q7Z404 712 aa20.24■□□□□ 0.83
SRRM1-207ENST00000468822 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
SRRM1-207ENST00000468822 POLR2AP24928 1970 aaKnown RBP20.24■□□□□ 0.83
SRRM1-207ENST00000468822 ASTN2O75129 1339 aaPredicted RBP20.24■□□□□ 0.83
SRRM1-207ENST00000468822 CHL1O00533 1208 aa20.23■□□□□ 0.83
SRRM1-207ENST00000468822 SF3B3Q15393 1217 aaKnown RBP20.23■□□□□ 0.83
SRRM1-207ENST00000468822 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
SRRM1-207ENST00000468822 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
SRRM1-207ENST00000468822 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
SRRM1-207ENST00000468822 ECE2O60344 883 aa20.22■□□□□ 0.83
SRRM1-207ENST00000468822 RGMBQ6NW40 437 aa20.22■□□□□ 0.83
SRRM1-207ENST00000468822 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
SRRM1-207ENST00000468822 GBA2Q9HCG7 927 aaPredicted RBP20.22■□□□□ 0.83
SRRM1-207ENST00000468822 PDE4DIPQ5VU43 2346 aa20.21■□□□□ 0.83
SRRM1-207ENST00000468822 SCN9AQ15858 1988 aa20.21■□□□□ 0.83
SRRM1-207ENST00000468822 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
SRRM1-207ENST00000468822 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
SRRM1-207ENST00000468822 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms