RNA–Protein interactions for RNA: ENST00000468774.3

ATP1A3-204, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-204ENST00000468774 ABCC4O15439 1325 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 FOXO4P98177 505 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 TTLL11Q8NHH1 800 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
ATP1A3-204ENST00000468774 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 CELF1Q92879 486 aaKnown RBP17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
ATP1A3-204ENST00000468774 CSF1RP07333 972 aa17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 PRELPP51888 382 aa17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 CTSWP56202 376 aa17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
ATP1A3-204ENST00000468774 NFKBIEO00221 500 aa17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 GRAPQ13588 217 aa17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 GREM2Q9H772 168 aa17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 MYH3P11055 1940 aa17.49■□□□□ 0.39
ATP1A3-204ENST00000468774 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 PPEF1O14829 653 aaPredicted RBP17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 BBOX1O75936 387 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 RLBP1P12271 317 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 RASSF7Q02833 373 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 CCDC152Q4G0S7 254 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
ATP1A3-204ENST00000468774 PLIN1O60240 522 aa17.47■□□□□ 0.39
ATP1A3-204ENST00000468774 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
ATP1A3-204ENST00000468774 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
ATP1A3-204ENST00000468774 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
ATP1A3-204ENST00000468774 LMBR1LQ6UX01 489 aa17.46■□□□□ 0.39
ATP1A3-204ENST00000468774 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 FAM161AQ3B820 660 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 CCDC93Q567U6 631 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 SP8Q8IXZ3 490 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 MEIS3Q99687 375 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 SBF1O95248 1867 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 CHD4Q14839 1912 aa17.45■□□□□ 0.38
ATP1A3-204ENST00000468774 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
ATP1A3-204ENST00000468774 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
ATP1A3-204ENST00000468774 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
ATP1A3-204ENST00000468774 ITGA6P23229 1130 aa17.43■□□□□ 0.38
ATP1A3-204ENST00000468774 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
ATP1A3-204ENST00000468774 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
ATP1A3-204ENST00000468774 CCDC88AQ3V6T2 1871 aa17.43■□□□□ 0.38
ATP1A3-204ENST00000468774 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
ATP1A3-204ENST00000468774 CC2D2BQ6DHV5 1058 aa17.42■□□□□ 0.38
ATP1A3-204ENST00000468774 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
ATP1A3-204ENST00000468774 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 C20orf194Q5TEA3 1177 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 ZNF594Q96JF6 807 aaPredicted RBP17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 SPEF2Q9C093 1822 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
ATP1A3-204ENST00000468774 UBTFL1P0CB47 393 aaPredicted RBP17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 GPSM2P81274 684 aa17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 TMC4Q7Z404 712 aa17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
ATP1A3-204ENST00000468774 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 WTIPA6NIX2 430 aaPredicted RBP17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 IFIT5Q13325 482 aaKnown RBP17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 MPNDQ8N594 471 aa17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 PSMD1Q99460 953 aa17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
ATP1A3-204ENST00000468774 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 LMNB1P20700 586 aa17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 RTFDC1Q9BY42 306 aaPredicted RBP17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
ATP1A3-204ENST00000468774 COL4A5P29400 1685 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 GNAI3P08754 354 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 RFX5P48382 616 aaPredicted RBP17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 GRIPAP1Q4V328 841 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 DPP8Q6V1X1 898 aaPredicted RBP17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 ITPRIPQ8IWB1 547 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
ATP1A3-204ENST00000468774 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
ATP1A3-204ENST00000468774 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
ATP1A3-204ENST00000468774 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms