RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 GNAI3P08754 354 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 C1orf115Q9H7X2 142 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 DDX60Q8IY21 1712 aaKnown RBP12.81□□□□□ -0.36
NPM3-203ENST00000468544 KIF13BQ9NQT8 1826 aa12.81□□□□□ -0.36
NPM3-203ENST00000468544 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
NPM3-203ENST00000468544 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
NPM3-203ENST00000468544 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
NPM3-203ENST00000468544 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
NPM3-203ENST00000468544 GREM2Q9H772 168 aa12.8□□□□□ -0.36
NPM3-203ENST00000468544 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
NPM3-203ENST00000468544 GNAI2P04899 355 aa12.79□□□□□ -0.36
NPM3-203ENST00000468544 HSP90B1P14625 803 aaKnown RBP12.79□□□□□ -0.36
NPM3-203ENST00000468544 NPR1P16066 1061 aa12.79□□□□□ -0.36
NPM3-203ENST00000468544 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
NPM3-203ENST00000468544 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
NPM3-203ENST00000468544 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
NPM3-203ENST00000468544 COL4A1P02462 1669 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
NPM3-203ENST00000468544 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
NPM3-203ENST00000468544 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
NPM3-203ENST00000468544 LAMB2P55268 1798 aa12.77□□□□□ -0.36
NPM3-203ENST00000468544 ITGA6P23229 1130 aa12.77□□□□□ -0.37
NPM3-203ENST00000468544 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
NPM3-203ENST00000468544 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
NPM3-203ENST00000468544 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
NPM3-203ENST00000468544 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
NPM3-203ENST00000468544 CHMP3Q9Y3E7 222 aa12.77□□□□□ -0.37
NPM3-203ENST00000468544 PNMA6EA0A0J9YXQ4 647 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 RFX5P48382 616 aaPredicted RBP12.76□□□□□ -0.37
NPM3-203ENST00000468544 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 KLHDC4Q8TBB5 520 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 ZNF594Q96JF6 807 aaPredicted RBP12.76□□□□□ -0.37
NPM3-203ENST00000468544 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 TAF1P21675 1872 aa12.76□□□□□ -0.37
NPM3-203ENST00000468544 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
NPM3-203ENST00000468544 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
NPM3-203ENST00000468544 MTX1Q13505 466 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 GRAPQ13588 217 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
NPM3-203ENST00000468544 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 SIRT2Q8IXJ6 389 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
NPM3-203ENST00000468544 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
NPM3-203ENST00000468544 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
NPM3-203ENST00000468544 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
NPM3-203ENST00000468544 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
NPM3-203ENST00000468544 YBX3P16989 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPM3-203ENST00000468544 CCDC57Q2TAC2 916 aa12.74□□□□□ -0.37
NPM3-203ENST00000468544 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
NPM3-203ENST00000468544 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
NPM3-203ENST00000468544 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
NPM3-203ENST00000468544 MYH3P11055 1940 aa12.73□□□□□ -0.37
NPM3-203ENST00000468544 C21orf2O43822 256 aa12.73□□□□□ -0.37
NPM3-203ENST00000468544 BBOX1O75936 387 aa12.73□□□□□ -0.37
NPM3-203ENST00000468544 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
NPM3-203ENST00000468544 POLA2Q14181 598 aa12.73□□□□□ -0.37
NPM3-203ENST00000468544 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
NPM3-203ENST00000468544 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
NPM3-203ENST00000468544 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
NPM3-203ENST00000468544 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
NPM3-203ENST00000468544 PA2G4Q9UQ80 394 aaKnown RBP12.73□□□□□ -0.37
NPM3-203ENST00000468544 UTRNP46939 3433 aa12.72□□□□□ -0.37
NPM3-203ENST00000468544 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
NPM3-203ENST00000468544 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
NPM3-203ENST00000468544 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
NPM3-203ENST00000468544 WTIPA6NIX2 430 aaPredicted RBP12.71□□□□□ -0.37
NPM3-203ENST00000468544 SP8Q8IXZ3 490 aa12.71□□□□□ -0.37
NPM3-203ENST00000468544 BSDC1Q9NW68 430 aaPredicted RBP12.71□□□□□ -0.37
NPM3-203ENST00000468544 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
NPM3-203ENST00000468544 RIPOR2Q9Y4F9 1068 aa12.71□□□□□ -0.37
NPM3-203ENST00000468544 BRCA1P38398 1863 aaKnown RBP12.71□□□□□ -0.37
NPM3-203ENST00000468544 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.38
NPM3-203ENST00000468544 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
NPM3-203ENST00000468544 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
NPM3-203ENST00000468544 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
NPM3-203ENST00000468544 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 SIL1Q9H173 461 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
NPM3-203ENST00000468544 GPSM2P81274 684 aa12.69□□□□□ -0.38
NPM3-203ENST00000468544 GPR162Q16538 588 aa12.69□□□□□ -0.38
NPM3-203ENST00000468544 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
NPM3-203ENST00000468544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms