RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
PTPN7-207ENST00000468385 MPNDQ8N594 471 aa17.18■□□□□ 0.34
PTPN7-207ENST00000468385 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
PTPN7-207ENST00000468385 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
PTPN7-207ENST00000468385 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
PTPN7-207ENST00000468385 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
PTPN7-207ENST00000468385 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
PTPN7-207ENST00000468385 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
PTPN7-207ENST00000468385 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
PTPN7-207ENST00000468385 AOC2O75106 756 aa17.16■□□□□ 0.34
PTPN7-207ENST00000468385 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-207ENST00000468385 GRAPQ13588 217 aa17.16■□□□□ 0.34
PTPN7-207ENST00000468385 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
PTPN7-207ENST00000468385 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
PTPN7-207ENST00000468385 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-207ENST00000468385 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
PTPN7-207ENST00000468385 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
PTPN7-207ENST00000468385 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
PTPN7-207ENST00000468385 YDJCA8MPS7 323 aa17.15■□□□□ 0.34
PTPN7-207ENST00000468385 RAD17O75943 681 aa17.15■□□□□ 0.34
PTPN7-207ENST00000468385 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
PTPN7-207ENST00000468385 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
PTPN7-207ENST00000468385 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
PTPN7-207ENST00000468385 DUOX1Q9NRD9 1551 aa17.15■□□□□ 0.34
PTPN7-207ENST00000468385 MAP2K2P36507 400 aa17.14■□□□□ 0.33
PTPN7-207ENST00000468385 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
PTPN7-207ENST00000468385 KRT24Q2M2I5 525 aa17.14■□□□□ 0.33
PTPN7-207ENST00000468385 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.33
PTPN7-207ENST00000468385 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
PTPN7-207ENST00000468385 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
PTPN7-207ENST00000468385 TNIP1Q15025 636 aa17.13■□□□□ 0.33
PTPN7-207ENST00000468385 ZC3H15Q8WU90 426 aaKnown RBP17.13■□□□□ 0.33
PTPN7-207ENST00000468385 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
PTPN7-207ENST00000468385 TSKSQ9UJT2 592 aa17.13■□□□□ 0.33
PTPN7-207ENST00000468385 TAF1P21675 1872 aa17.12■□□□□ 0.33
PTPN7-207ENST00000468385 CHL1O00533 1208 aa17.12■□□□□ 0.33
PTPN7-207ENST00000468385 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
PTPN7-207ENST00000468385 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
PTPN7-207ENST00000468385 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
PTPN7-207ENST00000468385 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
PTPN7-207ENST00000468385 RALBP1Q15311 655 aa17.11■□□□□ 0.33
PTPN7-207ENST00000468385 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
PTPN7-207ENST00000468385 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
PTPN7-207ENST00000468385 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
PTPN7-207ENST00000468385 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
PTPN7-207ENST00000468385 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
PTPN7-207ENST00000468385 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-207ENST00000468385 H7C1D1 291 aa17.09■□□□□ 0.33
PTPN7-207ENST00000468385 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
PTPN7-207ENST00000468385 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
PTPN7-207ENST00000468385 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
PTPN7-207ENST00000468385 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
PTPN7-207ENST00000468385 COL4A1P02462 1669 aa17.09■□□□□ 0.33
PTPN7-207ENST00000468385 PSMD14O00487 310 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 CA12O43570 354 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 DLK2Q6UY11 383 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 USP48Q86UV5 1035 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 DPF2Q92785 391 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
PTPN7-207ENST00000468385 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.32
PTPN7-207ENST00000468385 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
PTPN7-207ENST00000468385 CCDC85CA6NKD9 419 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 HOXB7P09629 217 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
PTPN7-207ENST00000468385 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
PTPN7-207ENST00000468385 EGFRP00533 1210 aa17.06■□□□□ 0.32
PTPN7-207ENST00000468385 GPSM2P81274 684 aa17.06■□□□□ 0.32
PTPN7-207ENST00000468385 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
PTPN7-207ENST00000468385 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-207ENST00000468385 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
PTPN7-207ENST00000468385 RGS19P49795 217 aa17.05■□□□□ 0.32
PTPN7-207ENST00000468385 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
PTPN7-207ENST00000468385 KCNQ5Q9NR82 932 aa17.05■□□□□ 0.32
PTPN7-207ENST00000468385 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
PTPN7-207ENST00000468385 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
PTPN7-207ENST00000468385 ECE2O60344 883 aa17.04■□□□□ 0.32
PTPN7-207ENST00000468385 HUNKP57058 714 aa17.04■□□□□ 0.32
PTPN7-207ENST00000468385 NOGQ13253 232 aa17.04■□□□□ 0.32
PTPN7-207ENST00000468385 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
PTPN7-207ENST00000468385 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-207ENST00000468385 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-207ENST00000468385 MCOLN1Q9GZU1 580 aa17.04■□□□□ 0.32
PTPN7-207ENST00000468385 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-207ENST00000468385 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
PTPN7-207ENST00000468385 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
PTPN7-207ENST00000468385 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
PTPN7-207ENST00000468385 EYA3Q99504 573 aa17.03■□□□□ 0.32
PTPN7-207ENST00000468385 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
PTPN7-207ENST00000468385 ADM5C9JUS6 153 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms