RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
RBM39-226ENST00000468086 MAP3K6O95382 1288 aa8.84□□□□□ -0.99
RBM39-226ENST00000468086 PCSK7Q16549 785 aa8.84□□□□□ -0.99
RBM39-226ENST00000468086 PLVAPQ9BX97 442 aa8.84□□□□□ -0.99
RBM39-226ENST00000468086 SPATA31C1P0DKV0 1188 aa8.83□□□□□ -1
RBM39-226ENST00000468086 RAB44Q7Z6P3 723 aaPredicted RBP8.83□□□□□ -1
RBM39-226ENST00000468086 HELQQ8TDG4 1101 aa8.83□□□□□ -1
RBM39-226ENST00000468086 PIK3R5Q8WYR1 880 aa8.83□□□□□ -1
RBM39-226ENST00000468086 SEPT3Q9UH03 358 aa8.83□□□□□ -1
RBM39-226ENST00000468086 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
RBM39-226ENST00000468086 ADH7P40394 386 aa8.82□□□□□ -1
RBM39-226ENST00000468086 RGL4Q8IZJ4 473 aa8.82□□□□□ -1
RBM39-226ENST00000468086 Q8N3U1 123 aa8.82□□□□□ -1
RBM39-226ENST00000468086 SPDYE3A6NKU9 549 aa8.81□□□□□ -1
RBM39-226ENST00000468086 XYLBO75191 536 aa8.81□□□□□ -1
RBM39-226ENST00000468086 NFKB1P19838 968 aa8.81□□□□□ -1
RBM39-226ENST00000468086 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
RBM39-226ENST00000468086 CMTR1Q8N1G2 835 aaKnown RBP8.81□□□□□ -1
RBM39-226ENST00000468086 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
RBM39-226ENST00000468086 FNDC3AQ9Y2H6 1198 aaKnown RBP8.81□□□□□ -1
RBM39-226ENST00000468086 KCNMB2Q9Y691 235 aa8.81□□□□□ -1
RBM39-226ENST00000468086 ZAP70P43403 619 aa8.8□□□□□ -1
RBM39-226ENST00000468086 GATA4P43694 442 aa8.8□□□□□ -1
RBM39-226ENST00000468086 DOC2BQ14184 412 aa8.8□□□□□ -1
RBM39-226ENST00000468086 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
RBM39-226ENST00000468086 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
RBM39-226ENST00000468086 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
RBM39-226ENST00000468086 RARAP10276 462 aa8.79□□□□□ -1
RBM39-226ENST00000468086 FAM26DQ5JW98 314 aa8.79□□□□□ -1
RBM39-226ENST00000468086 CARNS1A5YM72 827 aa8.78□□□□□ -1
RBM39-226ENST00000468086 SASH3O75995 380 aa8.78□□□□□ -1
RBM39-226ENST00000468086 NPR3P17342 541 aa8.78□□□□□ -1
RBM39-226ENST00000468086 TARSP26639 723 aaKnown RBP8.78□□□□□ -1
RBM39-226ENST00000468086 SF3B2Q13435 895 aaKnown RBP8.78□□□□□ -1
RBM39-226ENST00000468086 PRRT3Q5FWE3 981 aa8.78□□□□□ -1
RBM39-226ENST00000468086 ALKBH2Q6NS38 261 aa8.78□□□□□ -1
RBM39-226ENST00000468086 DHX32Q7L7V1 743 aaKnown RBP8.78□□□□□ -1
RBM39-226ENST00000468086 TRPM4Q8TD43 1214 aa8.78□□□□□ -1
RBM39-226ENST00000468086 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
RBM39-226ENST00000468086 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
RBM39-226ENST00000468086 ZFATQ9P243 1243 aa8.78□□□□□ -1
RBM39-226ENST00000468086 USP20Q9Y2K6 914 aa8.78□□□□□ -1
RBM39-226ENST00000468086 ZBTB39O15060 712 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
RBM39-226ENST00000468086 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 NLRP13Q86W25 1043 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 MICALL1Q8N3F8 863 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 RETREG2Q8NC44 543 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 IGFLR1Q9H665 355 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 TLR7Q9NYK1 1049 aaKnown RBP8.77□□□□□ -1.01
RBM39-226ENST00000468086 SLC6A14Q9UN76 642 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 STARD13Q9Y3M8 1113 aa8.77□□□□□ -1.01
RBM39-226ENST00000468086 UBAP1LF5GYI3 381 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 M0R082 166 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 APBA3O96018 575 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 ALBP02768 609 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 SOX18P35713 384 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 SCNN1AP37088 669 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 GPLD1P80108 840 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 ZNF417Q8TAU3 575 aa8.76□□□□□ -1.01
RBM39-226ENST00000468086 ZNF587Q96SQ5 575 aaPredicted RBP8.76□□□□□ -1.01
RBM39-226ENST00000468086 FAM13AO94988 1023 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 HOXD8P13378 290 aaPredicted RBP8.75□□□□□ -1.01
RBM39-226ENST00000468086 PCSK2P16519 638 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 NRLP54845 237 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
RBM39-226ENST00000468086 GPR152Q8TDT2 470 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 FRRS1LQ9P0K9 344 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 EGFL7Q9UHF1 273 aa8.75□□□□□ -1.01
RBM39-226ENST00000468086 LILRB5O75023 590 aa8.74□□□□□ -1.01
RBM39-226ENST00000468086 PSAPP07602 524 aa8.74□□□□□ -1.01
RBM39-226ENST00000468086 ITGB7P26010 798 aa8.74□□□□□ -1.01
RBM39-226ENST00000468086 TBC1D8BQ0IIM8 1120 aa8.74□□□□□ -1.01
RBM39-226ENST00000468086 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
RBM39-226ENST00000468086 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
RBM39-226ENST00000468086 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
RBM39-226ENST00000468086 ZBTB42B2RXF5 422 aa8.73□□□□□ -1.01
RBM39-226ENST00000468086 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
RBM39-226ENST00000468086 PLAURQ03405 335 aa8.73□□□□□ -1.01
RBM39-226ENST00000468086 PDE12Q6L8Q7 609 aaKnown RBP8.73□□□□□ -1.01
RBM39-226ENST00000468086 TTC9Q92623 222 aa8.73□□□□□ -1.01
RBM39-226ENST00000468086 MMP20O60882 483 aa8.72□□□□□ -1.01
RBM39-226ENST00000468086 MPSTP25325 297 aa8.72□□□□□ -1.01
RBM39-226ENST00000468086 MZF1P28698 734 aaPredicted RBP8.72□□□□□ -1.01
RBM39-226ENST00000468086 XKR5Q6UX68 686 aa8.72□□□□□ -1.01
RBM39-226ENST00000468086 FAM35AQ86V20 835 aa8.72□□□□□ -1.01
RBM39-226ENST00000468086 TTC16Q8NEE8 873 aa8.72□□□□□ -1.01
RBM39-226ENST00000468086 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
RBM39-226ENST00000468086 TRIM28Q13263 835 aaKnown RBP8.71□□□□□ -1.02
RBM39-226ENST00000468086 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
RBM39-226ENST00000468086 PSAPL1Q6NUJ1 521 aa8.71□□□□□ -1.02
RBM39-226ENST00000468086 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
RBM39-226ENST00000468086 NACC1Q96RE7 527 aa8.71□□□□□ -1.02
RBM39-226ENST00000468086 RGS9O75916 674 aaPredicted RBP8.7□□□□□ -1.02
RBM39-226ENST00000468086 ABL1P00519 1130 aa8.7□□□□□ -1.02
RBM39-226ENST00000468086 NID1P14543 1247 aa8.7□□□□□ -1.02
RBM39-226ENST00000468086 USP5P45974 858 aa8.7□□□□□ -1.02
RBM39-226ENST00000468086 TTC39BQ5VTQ0 682 aaPredicted RBP8.7□□□□□ -1.02
RBM39-226ENST00000468086 TXNDC2Q86VQ3 553 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms