RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 TAF1P21675 1872 aa14.79□□□□□ -0.04
RNF13-208ENST00000467996 CTSWP56202 376 aa14.79□□□□□ -0.04
RNF13-208ENST00000467996 HDAC1Q13547 482 aaPredicted RBP14.79□□□□□ -0.04
RNF13-208ENST00000467996 LMBR1LQ6UX01 489 aa14.79□□□□□ -0.04
RNF13-208ENST00000467996 PARP3Q9Y6F1 533 aa14.79□□□□□ -0.04
RNF13-208ENST00000467996 DLEC1Q9Y238 1755 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 IGHDP01880 384 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
RNF13-208ENST00000467996 ST5P78524 1137 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 SLC10A5Q5PT55 438 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 CACNA1SQ13698 1873 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 A0A1B0GUL6 1792 aa14.78□□□□□ -0.04
RNF13-208ENST00000467996 COL4A1P02462 1669 aa14.77□□□□□ -0.04
RNF13-208ENST00000467996 HMMRO75330 724 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 ZBTB7AO95365 584 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 CSF1RP07333 972 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 POLA2Q14181 598 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 C3orf67Q6ZVT6 689 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 TTLL11Q8NHH1 800 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 MTFR1LQ9H019 292 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
RNF13-208ENST00000467996 CHMP3Q9Y3E7 222 aa14.77□□□□□ -0.05
RNF13-208ENST00000467996 KDM2BQ8NHM5 1336 aa14.76□□□□□ -0.05
RNF13-208ENST00000467996 FAM161AQ3B820 660 aa14.76□□□□□ -0.05
RNF13-208ENST00000467996 CCDC85AQ96PX6 553 aaPredicted RBP14.76□□□□□ -0.05
RNF13-208ENST00000467996 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
RNF13-208ENST00000467996 KIAA1551Q9HCM1 1747 aa14.75□□□□□ -0.05
RNF13-208ENST00000467996 RTL9Q8NET4 1388 aa14.75□□□□□ -0.05
RNF13-208ENST00000467996 RFX5P48382 616 aaPredicted RBP14.75□□□□□ -0.05
RNF13-208ENST00000467996 GREM2Q9H772 168 aa14.75□□□□□ -0.05
RNF13-208ENST00000467996 SF3B3Q15393 1217 aaKnown RBP14.74□□□□□ -0.05
RNF13-208ENST00000467996 CCDC152Q4G0S7 254 aa14.74□□□□□ -0.05
RNF13-208ENST00000467996 NLRP3Q96P20 1036 aa14.74□□□□□ -0.05
RNF13-208ENST00000467996 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
RNF13-208ENST00000467996 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
RNF13-208ENST00000467996 ITGA6P23229 1130 aa14.73□□□□□ -0.05
RNF13-208ENST00000467996 CCDC57Q2TAC2 916 aa14.73□□□□□ -0.05
RNF13-208ENST00000467996 CENPQQ7L2Z9 268 aaPredicted RBP14.73□□□□□ -0.05
RNF13-208ENST00000467996 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
RNF13-208ENST00000467996 POLD1P28340 1107 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 PTPN12Q05209 780 aaKnown RBP14.72□□□□□ -0.05
RNF13-208ENST00000467996 IFIT5Q13325 482 aaKnown RBP14.72□□□□□ -0.05
RNF13-208ENST00000467996 CRY2Q49AN0 593 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 KLHDC4Q8TBB5 520 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 GCC1Q96CN9 775 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 BRIP1Q9BX63 1249 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 DCTPP1Q9H773 170 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
RNF13-208ENST00000467996 ANKRD18BA2A2Z9 1011 aa14.71□□□□□ -0.05
RNF13-208ENST00000467996 SMC5Q8IY18 1101 aa14.71□□□□□ -0.05
RNF13-208ENST00000467996 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
RNF13-208ENST00000467996 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.05
RNF13-208ENST00000467996 COPRSQ9NQ92 184 aa14.71□□□□□ -0.05
RNF13-208ENST00000467996 SEC31BQ9NQW1 1179 aa14.71□□□□□ -0.05
RNF13-208ENST00000467996 BRCA1P38398 1863 aaKnown RBP14.7□□□□□ -0.06
RNF13-208ENST00000467996 KLRG2A4D1S0 409 aaPredicted RBP14.7□□□□□ -0.06
RNF13-208ENST00000467996 SURF6O75683 361 aaKnown RBP14.7□□□□□ -0.06
RNF13-208ENST00000467996 TAF7LQ5H9L4 462 aa14.7□□□□□ -0.06
RNF13-208ENST00000467996 SIL1Q9H173 461 aa14.7□□□□□ -0.06
RNF13-208ENST00000467996 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
RNF13-208ENST00000467996 ARAP2Q8WZ64 1704 aa14.69□□□□□ -0.06
RNF13-208ENST00000467996 PDE6BP35913 854 aa14.69□□□□□ -0.06
RNF13-208ENST00000467996 PTGER2P43116 358 aa14.69□□□□□ -0.06
RNF13-208ENST00000467996 RPGRQ92834 1020 aaKnown RBP14.69□□□□□ -0.06
RNF13-208ENST00000467996 APBB1O00213 710 aa14.68□□□□□ -0.06
RNF13-208ENST00000467996 DDX46Q7L014 1031 aaKnown RBP14.68□□□□□ -0.06
RNF13-208ENST00000467996 CDC5LQ99459 802 aaKnown RBP14.68□□□□□ -0.06
RNF13-208ENST00000467996 EYA2O00167 538 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 RAB11FIP3O75154 756 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 CIAO1O76071 339 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 SRGNP10124 158 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
RNF13-208ENST00000467996 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
RNF13-208ENST00000467996 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
RNF13-208ENST00000467996 LRRC24Q50LG9 513 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 HSP90AB4PQ58FF6 505 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 CELF1Q92879 486 aaKnown RBP14.67□□□□□ -0.06
RNF13-208ENST00000467996 PUS3Q9BZE2 481 aaKnown RBP14.67□□□□□ -0.06
RNF13-208ENST00000467996 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
RNF13-208ENST00000467996 HOXA10P31260 410 aaPredicted RBP14.66□□□□□ -0.06
RNF13-208ENST00000467996 GRAPQ13588 217 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 LDHAL6AQ6ZMR3 332 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 ATG9AQ7Z3C6 839 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 C2CD5Q86YS7 1000 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 ERC1Q8IUD2 1116 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
RNF13-208ENST00000467996 RBM17Q96I25 401 aaKnown RBP14.66□□□□□ -0.06
RNF13-208ENST00000467996 SPON1Q9HCB6 807 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 SLX4Q8IY92 1834 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 LTBP1Q14766 1721 aa14.66□□□□□ -0.06
RNF13-208ENST00000467996 SASH1O94885 1247 aa14.65□□□□□ -0.06
RNF13-208ENST00000467996 NPR1P16066 1061 aa14.65□□□□□ -0.06
RNF13-208ENST00000467996 IL15P40933 162 aaPredicted RBP14.65□□□□□ -0.06
RNF13-208ENST00000467996 NUCB1Q02818 461 aa14.65□□□□□ -0.06
RNF13-208ENST00000467996 ANKRD45Q5TZF3 282 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms