RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
SEC16A-208ENST00000467838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
SEC16A-208ENST00000467838 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
SEC16A-208ENST00000467838 CTIFO43310 598 aaKnown RBP17.2■□□□□ 0.34
SEC16A-208ENST00000467838 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
SEC16A-208ENST00000467838 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
SEC16A-208ENST00000467838 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
SEC16A-208ENST00000467838 COL15A1P39059 1388 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
SEC16A-208ENST00000467838 KRT32Q14532 448 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
SEC16A-208ENST00000467838 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 JARID2Q92833 1246 aaPredicted RBP17.19■□□□□ 0.34
SEC16A-208ENST00000467838 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 BCL2L12Q9HB09 334 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 CBX8Q9HC52 389 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 DACT1Q9NYF0 836 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 TAF6LQ9Y6J9 622 aa17.19■□□□□ 0.34
SEC16A-208ENST00000467838 CAVIN2O95810 425 aa17.18■□□□□ 0.34
SEC16A-208ENST00000467838 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
SEC16A-208ENST00000467838 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
SEC16A-208ENST00000467838 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
SEC16A-208ENST00000467838 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
SEC16A-208ENST00000467838 DTNBO60941 627 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 TAF5LO75529 589 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
SEC16A-208ENST00000467838 RESTQ13127 1097 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 PDIA6Q15084 440 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 ZNF589Q86UQ0 364 aaPredicted RBP17.17■□□□□ 0.34
SEC16A-208ENST00000467838 TSC1Q92574 1164 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
SEC16A-208ENST00000467838 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
SEC16A-208ENST00000467838 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 IGKV5-2P06315 115 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 PTGS1P23219 599 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 ZNF75DP51815 510 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 LUZP1Q86V48 1076 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
SEC16A-208ENST00000467838 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
SEC16A-208ENST00000467838 CDC25BP30305 580 aa17.16■□□□□ 0.34
SEC16A-208ENST00000467838 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
SEC16A-208ENST00000467838 SYCP1Q15431 976 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
SEC16A-208ENST00000467838 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 ABCC6O95255 1503 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 ATP5JP18859 108 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 CAMK4Q16566 473 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
SEC16A-208ENST00000467838 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.34
SEC16A-208ENST00000467838 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
SEC16A-208ENST00000467838 LAMA4Q16363 1823 aa17.14■□□□□ 0.33
SEC16A-208ENST00000467838 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 CKAP2LQ8IYA6 745 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
SEC16A-208ENST00000467838 ZNF609O15014 1411 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 NR1I2O75469 434 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
SEC16A-208ENST00000467838 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
SEC16A-208ENST00000467838 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
SEC16A-208ENST00000467838 GCKRQ14397 625 aa17.12■□□□□ 0.33
SEC16A-208ENST00000467838 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
SEC16A-208ENST00000467838 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
SEC16A-208ENST00000467838 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
SEC16A-208ENST00000467838 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
SEC16A-208ENST00000467838 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
SEC16A-208ENST00000467838 JAK2O60674 1132 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 DMTNQ08495 405 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 BRF1Q92994 677 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
SEC16A-208ENST00000467838 DBNLQ9UJU6 430 aaKnown RBP17.11■□□□□ 0.33
SEC16A-208ENST00000467838 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
SEC16A-208ENST00000467838 ZNF165P49910 485 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 SIL1Q9H173 461 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
SEC16A-208ENST00000467838 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
SEC16A-208ENST00000467838 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
SEC16A-208ENST00000467838 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
SEC16A-208ENST00000467838 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
SEC16A-208ENST00000467838 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
SEC16A-208ENST00000467838 CFAP45Q9UL16 551 aa17.1■□□□□ 0.33
SEC16A-208ENST00000467838 KDM6AO15550 1401 aaPredicted RBP17.1■□□□□ 0.33
SEC16A-208ENST00000467838 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms