RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 API5Q9BZZ5 524 aaKnown RBP6.53□□□□□ -1.36
RIF1-209ENST00000467762 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
RIF1-209ENST00000467762 ATP13A2Q9NQ11 1180 aa6.53□□□□□ -1.36
RIF1-209ENST00000467762 SNRKQ9NRH2 765 aa6.53□□□□□ -1.36
RIF1-209ENST00000467762 SETD1AO15047 1707 aaKnown RBP6.53□□□□□ -1.36
RIF1-209ENST00000467762 A2ML1A8K2U0 1454 aa6.53□□□□□ -1.36
RIF1-209ENST00000467762 TECPR2O15040 1411 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 YEATS2Q9ULM3 1422 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 RIMS2Q9UQ26 1411 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.52□□□□□ -1.37
RIF1-209ENST00000467762 ERCC3P19447 782 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 VARSP26640 1264 aaKnown RBP6.52□□□□□ -1.37
RIF1-209ENST00000467762 NUCB1Q02818 461 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 CTDSPL2Q05D32 466 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 C22orf23Q9BZE7 217 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 CABP1Q9NZU7 370 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 STK26Q9P289 416 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 NOB1Q9ULX3 412 aaKnown RBP6.52□□□□□ -1.37
RIF1-209ENST00000467762 WASF2Q9Y6W5 498 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 AKAP12Q02952 1782 aa6.52□□□□□ -1.37
RIF1-209ENST00000467762 PTCH1Q13635 1447 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 MON2Q7Z3U7 1717 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 WASLO00401 505 aaPredicted RBP6.51□□□□□ -1.37
RIF1-209ENST00000467762 ZNF853P0CG23 659 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 TCF3P15923 654 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 ABL2P42684 1182 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 BMP2KLQ5H9B9 411 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 LRRN4Q8WUT4 740 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 PSMD1Q99460 953 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 KIAA1522Q9P206 1035 aaPredicted RBP6.51□□□□□ -1.37
RIF1-209ENST00000467762 POLKQ9UBT6 870 aa6.51□□□□□ -1.37
RIF1-209ENST00000467762 RIMBP3CA6NJZ7 1639 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 RIMBP3BA6NNM3 1639 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 RIMBP3Q9UFD9 1639 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 DIP2BQ9P265 1576 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 VAMP4O75379 141 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 BMP1P13497 986 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 IL13P35225 146 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
RIF1-209ENST00000467762 TMEM259Q4ZIN3 620 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 CHD1LQ86WJ1 897 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 SKAP1Q86WV1 359 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 HSCBQ8IWL3 235 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 COG3Q96JB2 828 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 ESF1Q9H501 851 aaKnown RBP6.5□□□□□ -1.37
RIF1-209ENST00000467762 CPS1P31327 1500 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 LRRC7Q96NW7 1537 aa6.5□□□□□ -1.37
RIF1-209ENST00000467762 SOS1Q07889 1333 aaPredicted RBP6.5□□□□□ -1.37
RIF1-209ENST00000467762 KIAA0232Q92628 1395 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 ZBTB7BO15156 539 aaPredicted RBP6.49□□□□□ -1.37
RIF1-209ENST00000467762 FRAT2O75474 233 aaPredicted RBP6.49□□□□□ -1.37
RIF1-209ENST00000467762 PRKAR2BP31323 418 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 NNTQ13423 1086 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 SAFB2Q14151 953 aaKnown RBP eCLIP6.49□□□□□ -1.37
RIF1-209ENST00000467762 AGERQ15109 404 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 PPP2R2DQ66LE6 453 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 TMEM57Q8N5G2 664 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 TSR2Q969E8 191 aaKnown RBP6.49□□□□□ -1.37
RIF1-209ENST00000467762 BCL2L13Q9BXK5 485 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 GNEQ9Y223 722 aaKnown RBP6.49□□□□□ -1.37
RIF1-209ENST00000467762 ABCC4O15439 1325 aa6.49□□□□□ -1.37
RIF1-209ENST00000467762 CARNS1A5YM72 827 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 POM121CA8CG34 1229 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 SNRPBP14678 240 aaKnown RBP6.48□□□□□ -1.37
RIF1-209ENST00000467762 RFC5P40937 340 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 SH3BP5LQ7L8J4 393 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 TRIM46Q7Z4K8 759 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 SH3RF1Q7Z6J0 888 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 BPHLQ86WA6 291 aaPredicted RBP6.48□□□□□ -1.37
RIF1-209ENST00000467762 RPAP2Q8IXW5 612 aaPredicted RBP6.48□□□□□ -1.37
RIF1-209ENST00000467762 MPNDQ8N594 471 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 UBXN4Q92575 508 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 NUDT16Q96DE0 195 aaKnown RBP6.48□□□□□ -1.37
RIF1-209ENST00000467762 C3P01024 1663 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 DLG5Q8TDM6 1919 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 PTPRCP08575 1304 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 TTC21BQ7Z4L5 1316 aa6.48□□□□□ -1.37
RIF1-209ENST00000467762 NRXN3Q9Y4C0 1643 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 ANKRD62A6NC57 917 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 CAPN5O15484 640 aaPredicted RBP6.47□□□□□ -1.37
RIF1-209ENST00000467762 HTATSF1O43719 755 aaKnown RBP6.47□□□□□ -1.37
RIF1-209ENST00000467762 AP1G2O75843 785 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 ADH1CP00326 375 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 MCM4P33991 863 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 FAM69CQ0P6D2 419 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 ARID5BQ14865 1188 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 NR6A1Q15406 480 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 TWISTNBQ3B726 338 aaPredicted RBP6.47□□□□□ -1.37
RIF1-209ENST00000467762 NBPF14Q5TI25 921 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 CASC1Q6TDU7 716 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 FAM43AQ8N2R8 423 aa6.47□□□□□ -1.37
RIF1-209ENST00000467762 TRIM47Q96LD4 638 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms