RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
SCAF4-204ENST00000467731 RPAP2Q8IXW5 612 aaPredicted RBP8.56□□□□□ -1.04
SCAF4-204ENST00000467731 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
SCAF4-204ENST00000467731 ANKRD31Q8N7Z5 1873 aa8.56□□□□□ -1.04
SCAF4-204ENST00000467731 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 PDE8AO60658 829 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
SCAF4-204ENST00000467731 LMBR1LQ6UX01 489 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
SCAF4-204ENST00000467731 ZMYND15Q9H091 742 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 PARP3Q9Y6F1 533 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 TAF1P21675 1872 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 IGHDP01880 384 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 CTSWP56202 376 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 ATP8B2P98198 1209 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 MTX1Q13505 466 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 TTLL11Q8NHH1 800 aa8.55□□□□□ -1.04
SCAF4-204ENST00000467731 CSF1RP07333 972 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 HSP90B1P14625 803 aaKnown RBP8.54□□□□□ -1.04
SCAF4-204ENST00000467731 ST5P78524 1137 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 HDAC1Q13547 482 aaPredicted RBP8.54□□□□□ -1.04
SCAF4-204ENST00000467731 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 C3orf67Q6ZVT6 689 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 MTFR1LQ9H019 292 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
SCAF4-204ENST00000467731 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 SSH3Q8TE77 659 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 GREM2Q9H772 168 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 SPEF2Q9C093 1822 aa8.54□□□□□ -1.04
SCAF4-204ENST00000467731 HMMRO75330 724 aa8.53□□□□□ -1.04
SCAF4-204ENST00000467731 POLA2Q14181 598 aa8.53□□□□□ -1.04
SCAF4-204ENST00000467731 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
SCAF4-204ENST00000467731 RWDD1Q9H446 243 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-204ENST00000467731 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
SCAF4-204ENST00000467731 PA2G4Q9UQ80 394 aaKnown RBP8.53□□□□□ -1.04
SCAF4-204ENST00000467731 RIC1Q4ADV7 1423 aa8.53□□□□□ -1.04
SCAF4-204ENST00000467731 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.04
SCAF4-204ENST00000467731 SOCS7O14512 581 aa8.52□□□□□ -1.04
SCAF4-204ENST00000467731 ITGA6P23229 1130 aa8.52□□□□□ -1.04
SCAF4-204ENST00000467731 CCDC57Q2TAC2 916 aa8.52□□□□□ -1.04
SCAF4-204ENST00000467731 CCDC152Q4G0S7 254 aa8.52□□□□□ -1.04
SCAF4-204ENST00000467731 COL4A1P02462 1669 aa8.52□□□□□ -1.05
SCAF4-204ENST00000467731 RFX5P48382 616 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 IFIT5Q13325 482 aaKnown RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 SF3B3Q15393 1217 aaKnown RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 ZNF594Q96JF6 807 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-204ENST00000467731 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
SCAF4-204ENST00000467731 EXOC6BQ9Y2D4 811 aa8.52□□□□□ -1.05
SCAF4-204ENST00000467731 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 KIF13BQ9NQT8 1826 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 POLD1P28340 1107 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 BRIP1Q9BX63 1249 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 SIL1Q9H173 461 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 SURF6O75683 361 aaKnown RBP8.51□□□□□ -1.05
SCAF4-204ENST00000467731 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 CENPQQ7L2Z9 268 aaPredicted RBP8.51□□□□□ -1.05
SCAF4-204ENST00000467731 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 COPRSQ9NQ92 184 aa8.51□□□□□ -1.05
SCAF4-204ENST00000467731 RTL9Q8NET4 1388 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 A0A0U1RQG5 324 aaPredicted RBP8.5□□□□□ -1.05
SCAF4-204ENST00000467731 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 KLRG2A4D1S0 409 aaPredicted RBP8.5□□□□□ -1.05
SCAF4-204ENST00000467731 PTGER2P43116 358 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 C10orf71Q711Q0 1435 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 APBB1O00213 710 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 GCC1Q96CN9 775 aa8.5□□□□□ -1.05
SCAF4-204ENST00000467731 PDE6BP35913 854 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 RPGRQ92834 1020 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 LRP5O75197 1615 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 OS9Q13438 667 aaPredicted RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 LRRC24Q50LG9 513 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 DDX46Q7L014 1031 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 CELF1Q92879 486 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 CDC5LQ99459 802 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 PUS3Q9BZE2 481 aaKnown RBP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 SRGNP10124 158 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 G3BP1Q13283 466 aaKnown RBP eCLIP8.49□□□□□ -1.05
SCAF4-204ENST00000467731 LDHAL6AQ6ZMR3 332 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 SPON1Q9HCB6 807 aa8.49□□□□□ -1.05
SCAF4-204ENST00000467731 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 IGHMBP2P38935 993 aaKnown RBP8.48□□□□□ -1.05
SCAF4-204ENST00000467731 RBM10P98175 930 aaKnown RBP8.48□□□□□ -1.05
SCAF4-204ENST00000467731 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 MPHOSPH8Q99549 860 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 A0A1B0GUL6 1792 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 EYA2O00167 538 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 SASH1O94885 1247 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 CHRNA5P30532 468 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 HSP90AB4PQ58FF6 505 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 ANKRD45Q5TZF3 282 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 ANKRD18AQ8IVF6 992 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms