RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 TOMM20Q15388 145 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 ANTXR1Q9H6X2 564 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 KANSL2Q9H9L4 492 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 RABGAP1Q9Y3P9 1069 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.13□□□□□ -0.954e-8■□□□□ 8.6
SPTBN1-204ENST00000467371 ORC4O43929 436 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 ABCB7O75027 752 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 OFD1O75665 1012 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 SLFNL1Q499Z3 407 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 MIGA1Q8NAN2 632 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 SUN2Q9UH99 717 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 TSPY4P0CV99 314 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 TSPY10P0CW01 314 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 PSMA3P25788 255 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 CNTN3Q9P232 1028 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 MAFFQ9ULX9 164 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 PPFIA3O75145 1194 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 ZSCAN20P17040 1043 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 GEMIN4P57678 1058 aaKnown RBP9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 JARID2Q92833 1246 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
SPTBN1-204ENST00000467371 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 TCEA3O75764 348 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 HYIQ5T013 277 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 FAM83BQ5T0W9 1011 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 NKAIN3Q8N8D7 197 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 NELL2Q99435 816 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 LUZP4Q9P127 313 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 EVLQ9UI08 416 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 ATP9BO43861 1147 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 KIF20AO95235 890 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 MASP1P48740 699 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 ALFQ53S48 1182 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 PPP4R4Q6NUP7 873 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 KIAA0907Q7Z7F0 614 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 APPL2Q8NEU8 664 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 ZHX1Q9UKY1 873 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 WDR62O43379 1518 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 UACAQ9BZF9 1416 aa9.12□□□□□ -0.95
SPTBN1-204ENST00000467371 VGLL3A8MV65 326 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 KLHL10Q6JEL2 608 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 SPICE1Q8N0Z3 855 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 ZNF496Q96IT1 587 aaPredicted RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 PAWRQ96IZ0 340 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 SNAPC4Q5SXM2 1469 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 MAGI3Q5TCQ9 1506 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 HSP90B2PQ58FF3 399 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 CCDC73Q6ZRK6 1079 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 RIC8AQ9NPQ8 531 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 LRPPRCP42704 1394 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 PES1O00541 588 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 HLTFQ14527 1009 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 KIAA1614Q5VZ46 1190 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 C14orf80Q86SX3 495 aa9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 PAIP2Q9BPZ3 127 aaKnown RBP9.11□□□□□ -0.95
SPTBN1-204ENST00000467371 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 U2AF1L5P0DN76 240 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 RASA1P20936 1047 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 OSBPP22059 807 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■□□□□ 8.3
SPTBN1-204ENST00000467371 CARD11Q9BXL7 1154 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 PLB1Q6P1J6 1458 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 HNRNPCP07910 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 DNAJC21Q5F1R6 531 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 HDGFL2Q7Z4V5 671 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 JAMLQ86YT9 394 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 FAM126AQ9BYI3 521 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 DHX29Q7Z478 1369 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 HFM1A2PYH4 1435 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 TNNT2P45379 298 aaPredicted RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 RACK1P63244 317 aaKnown RBP9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 MYO1HQ8N1T3 1032 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 RNF19AQ9NV58 838 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 USP19O94966 1318 aa9.1□□□□□ -0.95
SPTBN1-204ENST00000467371 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 PRMT3O60678 531 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 BAIAP3O94812 1187 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 ZNF76P36508 570 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 JAKMIP3Q5VZ66 844 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 PGBD4Q96DM1 585 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 GRPEL1Q9HAV7 217 aa9.09□□□□□ -0.95
SPTBN1-204ENST00000467371 FBXO2Q9UK22 296 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms