RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 EFCC1Q9HA90 598 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 USP20Q9Y2K6 914 aa7.21□□□□□ -1.26
VPS50-209ENST00000467326 RTCBQ9Y3I0 505 aaKnown RBP7.21□□□□□ -1.26
VPS50-209ENST00000467326 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.21□□□□□ -1.26
VPS50-209ENST00000467326 OPLAHO14841 1288 aa7.2□□□□□ -1.26
VPS50-209ENST00000467326 ADH7P40394 386 aa7.2□□□□□ -1.26
VPS50-209ENST00000467326 ZAP70P43403 619 aa7.2□□□□□ -1.26
VPS50-209ENST00000467326 PDE4CQ08493 712 aa7.2□□□□□ -1.26
VPS50-209ENST00000467326 CHSY3Q70JA7 882 aa7.2□□□□□ -1.26
VPS50-209ENST00000467326 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
VPS50-209ENST00000467326 ADARB2-AS1A8MUL3 147 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 CD163Q86VB7 1156 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
VPS50-209ENST00000467326 MDFIQ99750 246 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 UBE2OQ9C0C9 1292 aaKnown RBP7.19□□□□□ -1.26
VPS50-209ENST00000467326 SEMA6BQ9H3T3 888 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 C11orf16Q9NQ32 467 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 FAM13BQ9NYF5 915 aa7.19□□□□□ -1.26
VPS50-209ENST00000467326 XYLBO75191 536 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 RARAP10276 462 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 ALAS2P22557 587 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 MPSTP25325 297 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 DGKGP49619 791 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 MTMR3Q13615 1198 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
VPS50-209ENST00000467326 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 KCNMB2Q9Y691 235 aa7.18□□□□□ -1.26
VPS50-209ENST00000467326 ZBTB39O15060 712 aa7.17□□□□□ -1.26
VPS50-209ENST00000467326 ABL1P00519 1130 aa7.17□□□□□ -1.26
VPS50-209ENST00000467326 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
VPS50-209ENST00000467326 IGFLR1Q9H665 355 aa7.17□□□□□ -1.26
VPS50-209ENST00000467326 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
VPS50-209ENST00000467326 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 SASH3O75995 380 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 MAP3K6O95382 1288 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 EGFRP00533 1210 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 GATA4P43694 442 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 GPR152Q8TDT2 470 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 PIK3R5Q8WYR1 880 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 SUV39H2Q9H5I1 410 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 DNAJB12Q9NXW2 375 aaKnown RBP7.16□□□□□ -1.26
VPS50-209ENST00000467326 SLC6A14Q9UN76 642 aa7.16□□□□□ -1.26
VPS50-209ENST00000467326 SPDYE3A6NKU9 549 aa7.15□□□□□ -1.26
VPS50-209ENST00000467326 UBAP1LF5GYI3 381 aa7.15□□□□□ -1.26
VPS50-209ENST00000467326 HOXB4P17483 251 aaPredicted RBP7.15□□□□□ -1.26
VPS50-209ENST00000467326 ATCAYQ86WG3 371 aa7.15□□□□□ -1.26
VPS50-209ENST00000467326 ALBP02768 609 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 TARSP26639 723 aaKnown RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 ARID4AP29374 1257 aaPredicted RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 CHRNA4P43681 627 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 EIF1AXP47813 144 aaKnown RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 SERPINB4P48594 390 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 SF3B2Q13435 895 aaKnown RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 NOM1Q5C9Z4 860 aaKnown RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
VPS50-209ENST00000467326 EDEM1Q92611 657 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 ANO2Q9NQ90 1003 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 EGFL7Q9UHF1 273 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 NAGPAQ9UK23 515 aa7.14□□□□□ -1.27
VPS50-209ENST00000467326 H3BRB1 525 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 M0R082 166 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 FAM13AO94988 1023 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 ITGB7P26010 798 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 GPLD1P80108 840 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 DOC2BQ14184 412 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 PCSK7Q16549 785 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 ALKBH2Q6NS38 261 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 NLRP13Q86W25 1043 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 ZNF417Q8TAU3 575 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 NUDT16Q96DE0 195 aaKnown RBP7.13□□□□□ -1.27
VPS50-209ENST00000467326 ZNF587Q96SQ5 575 aaPredicted RBP7.13□□□□□ -1.27
VPS50-209ENST00000467326 TUT1Q9H6E5 874 aaKnown RBP7.13□□□□□ -1.27
VPS50-209ENST00000467326 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
VPS50-209ENST00000467326 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
VPS50-209ENST00000467326 PSAPP07602 524 aa7.12□□□□□ -1.27
VPS50-209ENST00000467326 SPATA31C1P0DKV0 1188 aa7.12□□□□□ -1.27
VPS50-209ENST00000467326 NPR3P17342 541 aa7.12□□□□□ -1.27
VPS50-209ENST00000467326 FKBP4Q02790 459 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS50-209ENST00000467326 DNM1Q05193 864 aaKnown RBP7.12□□□□□ -1.27
VPS50-209ENST00000467326 NBPF11Q86T75 865 aa7.12□□□□□ -1.27
VPS50-209ENST00000467326 TRPM4Q8TD43 1214 aa7.12□□□□□ -1.27
VPS50-209ENST00000467326 MMP20O60882 483 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 PCSK2P16519 638 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 NRLP54845 237 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 MLLT1Q03111 559 aaPredicted RBP7.11□□□□□ -1.27
VPS50-209ENST00000467326 PLAURQ03405 335 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 FAM35AQ86V20 835 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 GLYCTKQ8IVS8 523 aa7.11□□□□□ -1.27
VPS50-209ENST00000467326 TLR7Q9NYK1 1049 aaKnown RBP7.11□□□□□ -1.27
VPS50-209ENST00000467326 ICMTO60725 284 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 PDGFAP04085 211 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 RPLP1P05386 114 aaKnown RBP7.1□□□□□ -1.27
VPS50-209ENST00000467326 CPB1P15086 417 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 MZF1P28698 734 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms