RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
ATG3-204ENST00000467275 OCLNQ16625 522 aa9.86□□□□□ -0.83
ATG3-204ENST00000467275 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
ATG3-204ENST00000467275 ZFATQ9P243 1243 aa9.86□□□□□ -0.83
ATG3-204ENST00000467275 DHX32Q7L7V1 743 aaKnown RBP9.85□□□□□ -0.83
ATG3-204ENST00000467275 RGL4Q8IZJ4 473 aa9.85□□□□□ -0.83
ATG3-204ENST00000467275 CMTR1Q8N1G2 835 aaKnown RBP9.85□□□□□ -0.83
ATG3-204ENST00000467275 NACC1Q96RE7 527 aa9.85□□□□□ -0.83
ATG3-204ENST00000467275 NAGPAQ9UK23 515 aa9.85□□□□□ -0.83
ATG3-204ENST00000467275 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
ATG3-204ENST00000467275 USP20Q9Y2K6 914 aa9.85□□□□□ -0.83
ATG3-204ENST00000467275 CPB1P15086 417 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 DOC2BQ14184 412 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 GRIK4Q16099 956 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 TMEM164Q5U3C3 297 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 C16orf46Q6P387 395 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 PBXIP1Q96AQ6 731 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 MKNK1Q9BUB5 465 aa9.84□□□□□ -0.83
ATG3-204ENST00000467275 XYLBO75191 536 aa9.83□□□□□ -0.84
ATG3-204ENST00000467275 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
ATG3-204ENST00000467275 ARID4AP29374 1257 aaPredicted RBP9.83□□□□□ -0.84
ATG3-204ENST00000467275 AFF1P51825 1210 aaKnown RBP9.83□□□□□ -0.84
ATG3-204ENST00000467275 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
ATG3-204ENST00000467275 CXXC1Q9P0U4 656 aaPredicted RBP9.83□□□□□ -0.84
ATG3-204ENST00000467275 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
ATG3-204ENST00000467275 RAC1P63000 192 aa9.82□□□□□ -0.84
ATG3-204ENST00000467275 MLLT1Q03111 559 aaPredicted RBP9.82□□□□□ -0.84
ATG3-204ENST00000467275 TRPM4Q8TD43 1214 aa9.82□□□□□ -0.84
ATG3-204ENST00000467275 COL26A1Q96A83 441 aa9.82□□□□□ -0.84
ATG3-204ENST00000467275 A0A0A0MRY4 1105 aa9.81□□□□□ -0.84
ATG3-204ENST00000467275 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
ATG3-204ENST00000467275 ZBTB42B2RXF5 422 aa9.81□□□□□ -0.84
ATG3-204ENST00000467275 ELMSAN1Q6PJG2 1045 aa9.81□□□□□ -0.84
ATG3-204ENST00000467275 PTCD1O75127 700 aaKnown RBP9.8□□□□□ -0.84
ATG3-204ENST00000467275 EGFRP00533 1210 aa9.8□□□□□ -0.84
ATG3-204ENST00000467275 GPLD1P80108 840 aa9.8□□□□□ -0.84
ATG3-204ENST00000467275 NAA30Q147X3 362 aaPredicted RBP9.8□□□□□ -0.84
ATG3-204ENST00000467275 ETFBKMTQ8IXQ9 262 aa9.8□□□□□ -0.84
ATG3-204ENST00000467275 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
ATG3-204ENST00000467275 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
ATG3-204ENST00000467275 PERM1Q5SV97 790 aa9.79□□□□□ -0.84
ATG3-204ENST00000467275 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
ATG3-204ENST00000467275 CLP1Q92989 425 aaKnown RBP9.79□□□□□ -0.84
ATG3-204ENST00000467275 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
ATG3-204ENST00000467275 TLR7Q9NYK1 1049 aaKnown RBP9.79□□□□□ -0.84
ATG3-204ENST00000467275 C9orf172C9J069 976 aa9.78□□□□□ -0.84
ATG3-204ENST00000467275 ELNP15502 786 aa9.78□□□□□ -0.84
ATG3-204ENST00000467275 NRLP54845 237 aa9.78□□□□□ -0.84
ATG3-204ENST00000467275 HFE2Q6ZVN8 426 aa9.78□□□□□ -0.84
ATG3-204ENST00000467275 KCNMB2Q9Y691 235 aa9.78□□□□□ -0.84
ATG3-204ENST00000467275 PSAPP07602 524 aa9.77□□□□□ -0.85
ATG3-204ENST00000467275 EIF2AK2P19525 551 aaKnown RBP9.77□□□□□ -0.85
ATG3-204ENST00000467275 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
ATG3-204ENST00000467275 SEMA6BQ9H3T3 888 aa9.77□□□□□ -0.85
ATG3-204ENST00000467275 FAM13BQ9NYF5 915 aa9.77□□□□□ -0.85
ATG3-204ENST00000467275 PLAURQ03405 335 aa9.76□□□□□ -0.85
ATG3-204ENST00000467275 SMG9Q9H0W8 520 aaKnown RBP9.76□□□□□ -0.85
ATG3-204ENST00000467275 TNFRSF10BO14763 440 aa9.75□□□□□ -0.85
ATG3-204ENST00000467275 MMP20O60882 483 aa9.75□□□□□ -0.85
ATG3-204ENST00000467275 SELPP16109 830 aa9.75□□□□□ -0.85
ATG3-204ENST00000467275 WFDC8Q8IUA0 241 aa9.75□□□□□ -0.85
ATG3-204ENST00000467275 FMR1NBQ8N0W7 255 aaPredicted RBP9.75□□□□□ -0.85
ATG3-204ENST00000467275 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
ATG3-204ENST00000467275 ATP2B4P23634 1241 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 NRG1Q02297 640 aaPredicted RBP9.74□□□□□ -0.85
ATG3-204ENST00000467275 GRIK5Q16478 980 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 FAM26DQ5JW98 314 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 TTC9Q92623 222 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 TPSG1Q9NRR2 321 aa9.74□□□□□ -0.85
ATG3-204ENST00000467275 LOC102724428A0A0B4J2F2 783 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 UBAP1LF5GYI3 381 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 J3QW42 95 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 GHRHP01286 108 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 ZAP70P43403 619 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 SIK1P57059 783 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 SHISA2Q6UWI4 295 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 LENG1Q96BZ8 264 aaPredicted RBP9.73□□□□□ -0.85
ATG3-204ENST00000467275 NSUN5Q96P11 429 aaKnown RBP9.73□□□□□ -0.85
ATG3-204ENST00000467275 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 STIM2Q9P246 746 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 USP21Q9UK80 565 aa9.73□□□□□ -0.85
ATG3-204ENST00000467275 SOX18P35713 384 aa9.72□□□□□ -0.85
ATG3-204ENST00000467275 ADGRE1Q14246 886 aa9.72□□□□□ -0.85
ATG3-204ENST00000467275 MBTPS1Q14703 1052 aa9.72□□□□□ -0.85
ATG3-204ENST00000467275 TRIP4Q15650 581 aaPredicted RBP9.72□□□□□ -0.85
ATG3-204ENST00000467275 DTWD1Q8N5C7 304 aa9.72□□□□□ -0.85
ATG3-204ENST00000467275 ABTB2Q8N961 1025 aa9.72□□□□□ -0.85
ATG3-204ENST00000467275 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
ATG3-204ENST00000467275 RSPO4Q2I0M5 234 aaPredicted RBP9.71□□□□□ -0.86
ATG3-204ENST00000467275 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
ATG3-204ENST00000467275 PLD4Q96BZ4 506 aa9.71□□□□□ -0.86
ATG3-204ENST00000467275 SLAIN2Q9P270 581 aa9.71□□□□□ -0.86
ATG3-204ENST00000467275 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
ATG3-204ENST00000467275 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
ATG3-204ENST00000467275 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
ATG3-204ENST00000467275 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
ATG3-204ENST00000467275 GDF6Q6KF10 455 aaPredicted RBP9.69□□□□□ -0.86
ATG3-204ENST00000467275 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
ATG3-204ENST00000467275 ZBTB39O15060 712 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms