RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 DTNBO60941 627 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 NCLP19338 710 aaKnown RBP13.73□□□□□ -0.21
HPS1-208ENST00000467246 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
HPS1-208ENST00000467246 TEX13AQ9BXU3 409 aaPredicted RBP13.73□□□□□ -0.21
HPS1-208ENST00000467246 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
HPS1-208ENST00000467246 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 CYP46A1Q9Y6A2 500 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
HPS1-208ENST00000467246 EYA2O00167 538 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 STARD3NLO95772 234 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 MRE11P49959 708 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 VPS53Q5VIR6 699 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
HPS1-208ENST00000467246 FAM89AQ96GI7 184 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
HPS1-208ENST00000467246 HAUS7Q99871 368 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
HPS1-208ENST00000467246 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
HPS1-208ENST00000467246 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
HPS1-208ENST00000467246 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
HPS1-208ENST00000467246 EXOC5O00471 708 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 TAF5LO75529 589 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 FOXD4L6Q3SYB3 417 aaPredicted RBP13.71□□□□□ -0.21
HPS1-208ENST00000467246 FOXD4L3Q6VB84 417 aaPredicted RBP13.71□□□□□ -0.21
HPS1-208ENST00000467246 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 HLFQ16534 295 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
HPS1-208ENST00000467246 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
HPS1-208ENST00000467246 BCL9O00512 1426 aa13.71□□□□□ -0.22
HPS1-208ENST00000467246 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.22
HPS1-208ENST00000467246 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.22
HPS1-208ENST00000467246 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 ZNF609O15014 1411 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
HPS1-208ENST00000467246 CYP19A1P11511 503 aaPredicted RBP13.7□□□□□ -0.22
HPS1-208ENST00000467246 GPTP24298 496 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 TCEANC2Q96MN5 208 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 GPR108Q9NPR9 543 aa13.7□□□□□ -0.22
HPS1-208ENST00000467246 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
HPS1-208ENST00000467246 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 GOLIM4O00461 696 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 ME3Q16798 604 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 ITGB4P16144 1822 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 JCADQ9P266 1359 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 WDR33Q9C0J8 1336 aaKnown RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 KBTBD3Q8NAB2 608 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
HPS1-208ENST00000467246 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
HPS1-208ENST00000467246 CIAO1O76071 339 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 ZBTB38Q8NAP3 1195 aaPredicted RBP13.68□□□□□ -0.22
HPS1-208ENST00000467246 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
HPS1-208ENST00000467246 TPCN1Q9ULQ1 816 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 SYT1P21579 422 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 PSMA5P28066 241 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 PAG1Q9NWQ8 432 aa13.68□□□□□ -0.22
HPS1-208ENST00000467246 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
HPS1-208ENST00000467246 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 GDPD2Q9HCC8 539 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 CEP126Q9P2H0 1117 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 NLRP10Q86W26 655 aa13.67□□□□□ -0.22
HPS1-208ENST00000467246 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
HPS1-208ENST00000467246 CSF1RP07333 972 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
HPS1-208ENST00000467246 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 STX6O43752 255 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 IFIT1P09914 478 aaKnown RBP13.66□□□□□ -0.22
HPS1-208ENST00000467246 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 GJB2P29033 226 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 PLA2G12BQ9BX93 195 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 A0A0G2JS52 829 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 ADORA1P30542 326 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
HPS1-208ENST00000467246 ZSCAN22P10073 491 aaPredicted RBP13.65□□□□□ -0.22
HPS1-208ENST00000467246 IFIT5Q13325 482 aaKnown RBP13.65□□□□□ -0.22
HPS1-208ENST00000467246 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
HPS1-208ENST00000467246 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
HPS1-208ENST00000467246 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
HPS1-208ENST00000467246 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms