RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 TMC4Q7Z404 712 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 MPNDQ8N594 471 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 POLR2AP24928 1970 aaKnown RBP11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 TNIP1Q15025 636 aa11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 NLRP10Q86W26 655 aa11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 GRAPQ13588 217 aa11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
PTPDC1-203ENST00000467049 BRPF1P55201 1214 aaPredicted RBP11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 TCIRG1Q13488 830 aa11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 SH3TC1Q8TE82 1336 aa11.75□□□□□ -0.53
PTPDC1-203ENST00000467049 AOC2O75106 756 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 RGS19P49795 217 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 GRM1Q13255 1194 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 SLC34A2O95436 690 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 ANXA1P04083 346 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 RIPK4P57078 832 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
PTPDC1-203ENST00000467049 PSME4Q14997 1843 aa11.73□□□□□ -0.53
PTPDC1-203ENST00000467049 AKAP11Q9UKA4 1901 aa11.73□□□□□ -0.53
PTPDC1-203ENST00000467049 RAD17O75943 681 aa11.73□□□□□ -0.53
PTPDC1-203ENST00000467049 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
PTPDC1-203ENST00000467049 YDJCA8MPS7 323 aa11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 H7C1D1 291 aa11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 DPF2Q92785 391 aa11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 CNOT7Q9UIV1 285 aaKnown RBP11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 MLLT1Q03111 559 aaPredicted RBP11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
PTPDC1-203ENST00000467049 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
PTPDC1-203ENST00000467049 NOGQ13253 232 aa11.71□□□□□ -0.53
PTPDC1-203ENST00000467049 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
PTPDC1-203ENST00000467049 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
PTPDC1-203ENST00000467049 SCN9AQ15858 1988 aa11.71□□□□□ -0.54
PTPDC1-203ENST00000467049 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 ISCA1Q9BUE6 129 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 SHTN1A0MZ66 631 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 CHL1O00533 1208 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 HOXB7P09629 217 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 RALBP1Q15311 655 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
PTPDC1-203ENST00000467049 COL4A1P02462 1669 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 PSMD14O00487 310 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 HUNKP57058 714 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 EYA3Q99504 573 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 ZNF609O15014 1411 aa11.69□□□□□ -0.54
PTPDC1-203ENST00000467049 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 RGMBQ6NW40 437 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 SAGE1Q9NXZ1 904 aa11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
PTPDC1-203ENST00000467049 FAM155AB1AL88 458 aaPredicted RBP11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 ECE2O60344 883 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 GPSM2P81274 684 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 DGKZQ13574 1117 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 C2orf69Q8N8R5 385 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 GBA2Q9HCG7 927 aaPredicted RBP11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 POLLQ9UGP5 575 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 NSFL1CQ9UNZ2 370 aaKnown RBP11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
PTPDC1-203ENST00000467049 C6orf229H3BNL8 230 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 TBC1D10BQ4KMP7 808 aaPredicted RBP11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 MYH3P11055 1940 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms