RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 APLP1P51693 650 aa29.01■■■□□ 2.23
SSR2-204ENST00000467041 G2E3Q7L622 706 aa29.01■■■□□ 2.23
SSR2-204ENST00000467041 L3MBTL3Q96JM7 780 aaPredicted RBP29.01■■■□□ 2.23
SSR2-204ENST00000467041 PCCAP05165 728 aaPredicted RBP29■■■□□ 2.23
SSR2-204ENST00000467041 HSP90B1P14625 803 aaKnown RBP29■■■□□ 2.23
SSR2-204ENST00000467041 TMC4Q7Z404 712 aa29■■■□□ 2.23
SSR2-204ENST00000467041 LARGE2Q8N3Y3 721 aa28.99■■■□□ 2.23
SSR2-204ENST00000467041 RTFDC1Q9BY42 306 aaPredicted RBP28.99■■■□□ 2.23
SSR2-204ENST00000467041 VPS33BQ9H267 617 aa28.99■■■□□ 2.23
SSR2-204ENST00000467041 MYH16Q9H6N6 1097 aa28.99■■■□□ 2.23
SSR2-204ENST00000467041 TAF1P21675 1872 aa28.98■■■□□ 2.23
SSR2-204ENST00000467041 MPNDQ8N594 471 aa28.98■■■□□ 2.23
SSR2-204ENST00000467041 SUPT20HQ8NEM7 779 aa28.98■■■□□ 2.23
SSR2-204ENST00000467041 COL4A5P29400 1685 aa28.97■■■□□ 2.23
SSR2-204ENST00000467041 IQCA1LA6NCM1 817 aa28.97■■■□□ 2.23
SSR2-204ENST00000467041 IGKV5-2P06315 115 aa28.97■■■□□ 2.23
SSR2-204ENST00000467041 DPP8Q6V1X1 898 aaPredicted RBP28.97■■■□□ 2.23
SSR2-204ENST00000467041 CELF1Q92879 486 aaKnown RBP28.97■■■□□ 2.23
SSR2-204ENST00000467041 NEXNQ0ZGT2 675 aa28.96■■■□□ 2.23
SSR2-204ENST00000467041 FLIIQ13045 1269 aa28.96■■■□□ 2.23
SSR2-204ENST00000467041 ZNF521Q96K83 1311 aa28.95■■■□□ 2.23
SSR2-204ENST00000467041 PPIP5K2O43314 1243 aa28.95■■■□□ 2.22
SSR2-204ENST00000467041 EIF6P56537 245 aaKnown RBP28.95■■■□□ 2.22
SSR2-204ENST00000467041 GPC2Q8N158 579 aa28.95■■■□□ 2.22
SSR2-204ENST00000467041 JARID2Q92833 1246 aaPredicted RBP28.95■■■□□ 2.22
SSR2-204ENST00000467041 CACNA1FO60840 1977 aa28.94■■■□□ 2.22
SSR2-204ENST00000467041 PDE8AO60658 829 aa28.94■■■□□ 2.22
SSR2-204ENST00000467041 SCN4AP35499 1836 aa28.93■■■□□ 2.22
SSR2-204ENST00000467041 AOC3Q16853 763 aa28.93■■■□□ 2.22
SSR2-204ENST00000467041 NIM1KQ8IY84 436 aa28.93■■■□□ 2.22
SSR2-204ENST00000467041 TAF1DQ9H5J8 278 aaPredicted RBP28.93■■■□□ 2.22
SSR2-204ENST00000467041 CDHR2Q9BYE9 1310 aa28.93■■■□□ 2.22
SSR2-204ENST00000467041 NEURL1BA8MQ27 555 aa28.92■■■□□ 2.22
SSR2-204ENST00000467041 RPS8P62241 208 aaKnown RBP28.92■■■□□ 2.22
SSR2-204ENST00000467041 FKBP5Q13451 457 aaPredicted RBP28.91■■■□□ 2.22
SSR2-204ENST00000467041 CWF19L2Q2TBE0 894 aaKnown RBP28.91■■■□□ 2.22
SSR2-204ENST00000467041 HACL1Q9UJ83 578 aa28.91■■■□□ 2.22
SSR2-204ENST00000467041 CCDC152Q4G0S7 254 aa28.9■■■□□ 2.22
SSR2-204ENST00000467041 SEC31BQ9NQW1 1179 aa28.9■■■□□ 2.22
SSR2-204ENST00000467041 LRRC37AA6NMS7 1700 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 POTEIP0CG38 1075 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 POTEJP0CG39 1038 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 KIAA2012Q0VF49 1180 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 DNAAF4Q8WXU2 420 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 GJA3Q9Y6H8 435 aa28.89■■■□□ 2.22
SSR2-204ENST00000467041 COL4A1P02462 1669 aa28.89■■■□□ 2.21
SSR2-204ENST00000467041 CHADLQ6NUI6 762 aa28.88■■■□□ 2.21
SSR2-204ENST00000467041 DNAJC5GQ8N7S2 189 aa28.88■■■□□ 2.21
SSR2-204ENST00000467041 ZNRF3Q9ULT6 936 aa28.88■■■□□ 2.21
SSR2-204ENST00000467041 NSFL1CQ9UNZ2 370 aaKnown RBP28.88■■■□□ 2.21
SSR2-204ENST00000467041 H7C1W4 665 aa28.87■■■□□ 2.21
SSR2-204ENST00000467041 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
SSR2-204ENST00000467041 EPHX2P34913 555 aa28.86■■■□□ 2.21
SSR2-204ENST00000467041 LDHDQ86WU2 507 aa28.86■■■□□ 2.21
SSR2-204ENST00000467041 DUOX1Q9NRD9 1551 aa28.85■■■□□ 2.21
SSR2-204ENST00000467041 GPSM2P81274 684 aa28.85■■■□□ 2.21
SSR2-204ENST00000467041 GCKRQ14397 625 aa28.85■■■□□ 2.21
SSR2-204ENST00000467041 LINS1Q8NG48 757 aa28.85■■■□□ 2.21
SSR2-204ENST00000467041 CCDC85AQ96PX6 553 aaPredicted RBP28.85■■■□□ 2.21
SSR2-204ENST00000467041 CTSWP56202 376 aa28.84■■■□□ 2.21
SSR2-204ENST00000467041 HTRA3P83110 453 aa28.84■■■□□ 2.21
SSR2-204ENST00000467041 CXCL9Q07325 125 aa28.83■■■□□ 2.21
SSR2-204ENST00000467041 UBE3BQ7Z3V4 1068 aa28.83■■■□□ 2.21
SSR2-204ENST00000467041 PNMA8AQ86V59 439 aaPredicted RBP28.83■■■□□ 2.21
SSR2-204ENST00000467041 TTLL11Q8NHH1 800 aa28.83■■■□□ 2.21
SSR2-204ENST00000467041 SCNN1DP51172 638 aa28.82■■■□□ 2.2
SSR2-204ENST00000467041 WASHC4Q2M389 1173 aa28.82■■■□□ 2.2
SSR2-204ENST00000467041 EAPPQ56P03 285 aaPredicted RBP28.82■■■□□ 2.2
SSR2-204ENST00000467041 POLLQ9UGP5 575 aa28.82■■■□□ 2.2
SSR2-204ENST00000467041 E9PSI1 815 aa28.81■■■□□ 2.2
SSR2-204ENST00000467041 C6orf229H3BNL8 230 aa28.81■■■□□ 2.2
SSR2-204ENST00000467041 LMOD1P29536 600 aaPredicted RBP28.81■■■□□ 2.2
SSR2-204ENST00000467041 PODXL2Q9NZ53 605 aa28.81■■■□□ 2.2
SSR2-204ENST00000467041 F6X3S4 739 aa28.8■■■□□ 2.2
SSR2-204ENST00000467041 CASP7P55210 303 aa28.8■■■□□ 2.2
SSR2-204ENST00000467041 ANKRD18AQ8IVF6 992 aa28.8■■■□□ 2.2
SSR2-204ENST00000467041 TBC1D16Q8TBP0 767 aa28.8■■■□□ 2.2
SSR2-204ENST00000467041 PLA2G12BQ9BX93 195 aa28.8■■■□□ 2.2
SSR2-204ENST00000467041 CIAPIN1Q6FI81 312 aa28.79■■■□□ 2.2
SSR2-204ENST00000467041 CDC5LQ99459 802 aaKnown RBP28.79■■■□□ 2.2
SSR2-204ENST00000467041 CLEC11AQ9Y240 323 aa28.79■■■□□ 2.2
SSR2-204ENST00000467041 RTL9Q8NET4 1388 aa28.78■■■□□ 2.2
SSR2-204ENST00000467041 EPS15P42566 896 aa28.78■■■□□ 2.2
SSR2-204ENST00000467041 BEND3Q5T5X7 828 aa28.78■■■□□ 2.2
SSR2-204ENST00000467041 EYA3Q99504 573 aa28.78■■■□□ 2.2
SSR2-204ENST00000467041 GREM2Q9H772 168 aa28.78■■■□□ 2.2
SSR2-204ENST00000467041 LTBP1Q14766 1721 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 MYH3P11055 1940 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 YDJCA8MPS7 323 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 RIMBP2O15034 1052 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 SLFN5Q08AF3 891 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 TNIP1Q15025 636 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 ANKIB1Q9P2G1 1089 aa28.77■■■□□ 2.2
SSR2-204ENST00000467041 ADAMTSL1Q8N6G6 1762 aa28.76■■■□□ 2.19
SSR2-204ENST00000467041 RAD17O75943 681 aa28.76■■■□□ 2.19
SSR2-204ENST00000467041 KLRG1Q96E93 195 aa28.76■■■□□ 2.19
SSR2-204ENST00000467041 GPRC5DQ9NZD1 345 aa28.76■■■□□ 2.19
SSR2-204ENST00000467041 ITGBL1O95965 494 aaPredicted RBP28.75■■■□□ 2.19
SSR2-204ENST00000467041 PASKQ96RG2 1323 aa28.74■■■□□ 2.19
SSR2-204ENST00000467041 GPR101Q96P66 508 aaPredicted RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms