RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 MSL1Q68DK7 614 aa16.47■□□□□ 0.23
SEC22A-203ENST00000466950 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
SEC22A-203ENST00000466950 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
SEC22A-203ENST00000466950 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
SEC22A-203ENST00000466950 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
SEC22A-203ENST00000466950 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
SEC22A-203ENST00000466950 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
SEC22A-203ENST00000466950 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
SEC22A-203ENST00000466950 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
SEC22A-203ENST00000466950 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
SEC22A-203ENST00000466950 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
SEC22A-203ENST00000466950 TTLL11Q8NHH1 800 aa16.46■□□□□ 0.23
SEC22A-203ENST00000466950 NPHP1O15259 732 aa16.45■□□□□ 0.22
SEC22A-203ENST00000466950 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
SEC22A-203ENST00000466950 CCDC152Q4G0S7 254 aa16.45■□□□□ 0.22
SEC22A-203ENST00000466950 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
SEC22A-203ENST00000466950 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SEC22A-203ENST00000466950 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
SEC22A-203ENST00000466950 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
SEC22A-203ENST00000466950 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
SEC22A-203ENST00000466950 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
SEC22A-203ENST00000466950 SOCS7O14512 581 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 SMC5Q8IY18 1101 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
SEC22A-203ENST00000466950 IGHDP01880 384 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 POLD1P28340 1107 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
SEC22A-203ENST00000466950 COL4A1P02462 1669 aa16.42■□□□□ 0.22
SEC22A-203ENST00000466950 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
SEC22A-203ENST00000466950 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
SEC22A-203ENST00000466950 IFIT5Q13325 482 aaKnown RBP16.41■□□□□ 0.22
SEC22A-203ENST00000466950 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
SEC22A-203ENST00000466950 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
SEC22A-203ENST00000466950 GREM2Q9H772 168 aa16.41■□□□□ 0.22
SEC22A-203ENST00000466950 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
SEC22A-203ENST00000466950 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
SEC22A-203ENST00000466950 ITGA6P23229 1130 aa16.4■□□□□ 0.22
SEC22A-203ENST00000466950 PDE6BP35913 854 aa16.4■□□□□ 0.22
SEC22A-203ENST00000466950 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
SEC22A-203ENST00000466950 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
SEC22A-203ENST00000466950 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
SEC22A-203ENST00000466950 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
SEC22A-203ENST00000466950 CIAO1O76071 339 aa16.39■□□□□ 0.21
SEC22A-203ENST00000466950 RAB11FIP3O75154 756 aa16.38■□□□□ 0.21
SEC22A-203ENST00000466950 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
SEC22A-203ENST00000466950 ERC1Q8IUD2 1116 aa16.38■□□□□ 0.21
SEC22A-203ENST00000466950 PTGER2P43116 358 aa16.37■□□□□ 0.21
SEC22A-203ENST00000466950 CCDC24Q8N4L8 307 aa16.37■□□□□ 0.21
SEC22A-203ENST00000466950 SLX4Q8IY92 1834 aa16.37■□□□□ 0.21
SEC22A-203ENST00000466950 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
SEC22A-203ENST00000466950 EYA2O00167 538 aa16.36■□□□□ 0.21
SEC22A-203ENST00000466950 SURF6O75683 361 aaKnown RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 NPR1P16066 1061 aa16.36■□□□□ 0.21
SEC22A-203ENST00000466950 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
SEC22A-203ENST00000466950 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
SEC22A-203ENST00000466950 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
SEC22A-203ENST00000466950 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
SEC22A-203ENST00000466950 SRGNP10124 158 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
SEC22A-203ENST00000466950 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
SEC22A-203ENST00000466950 GRAPQ13588 217 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
SEC22A-203ENST00000466950 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
SEC22A-203ENST00000466950 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
SEC22A-203ENST00000466950 NUCB1Q02818 461 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 G3BP1Q13283 466 aaKnown RBP eCLIP16.34■□□□□ 0.21
SEC22A-203ENST00000466950 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 ATG9AQ7Z3C6 839 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 ANKRD18AQ8IVF6 992 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 MASTLQ96GX5 879 aa16.34■□□□□ 0.21
SEC22A-203ENST00000466950 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
SEC22A-203ENST00000466950 AK9Q5TCS8 1911 aa16.33■□□□□ 0.21
SEC22A-203ENST00000466950 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.2
SEC22A-203ENST00000466950 RIPOR2Q9Y4F9 1068 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 ZNF609O15014 1411 aa16.33■□□□□ 0.2
SEC22A-203ENST00000466950 H0YIN7 160 aa16.32■□□□□ 0.2
SEC22A-203ENST00000466950 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms