RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 USP44Q9H0E7 712 aa12.69□□□□□ -0.38
PTPN20-211ENST00000466912 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
PTPN20-211ENST00000466912 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-211ENST00000466912 C21orf2O43822 256 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 CSF1RP07333 972 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-211ENST00000466912 CTSWP56202 376 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 INTS3Q68E01 1043 aaKnown RBP12.68□□□□□ -0.38
PTPN20-211ENST00000466912 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 TTLL11Q8NHH1 800 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
PTPN20-211ENST00000466912 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-211ENST00000466912 FOXO4P98177 505 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 GRAPQ13588 217 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
PTPN20-211ENST00000466912 GRAPLQ8TC17 118 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-211ENST00000466912 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
PTPN20-211ENST00000466912 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
PTPN20-211ENST00000466912 BRCA1P38398 1863 aaKnown RBP12.66□□□□□ -0.38
PTPN20-211ENST00000466912 BBOX1O75936 387 aa12.66□□□□□ -0.38
PTPN20-211ENST00000466912 CLUAP1Q96AJ1 413 aa12.66□□□□□ -0.38
PTPN20-211ENST00000466912 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
PTPN20-211ENST00000466912 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-211ENST00000466912 GREM2Q9H772 168 aa12.66□□□□□ -0.38
PTPN20-211ENST00000466912 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-211ENST00000466912 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 NFKBIEO00221 500 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-211ENST00000466912 RLBP1P12271 317 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 RTL9Q8NET4 1388 aa12.65□□□□□ -0.38
PTPN20-211ENST00000466912 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
PTPN20-211ENST00000466912 PRELPP51888 382 aa12.64□□□□□ -0.39
PTPN20-211ENST00000466912 RPS8P62241 208 aaKnown RBP12.64□□□□□ -0.39
PTPN20-211ENST00000466912 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
PTPN20-211ENST00000466912 RABL6Q3YEC7 729 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-211ENST00000466912 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
PTPN20-211ENST00000466912 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
PTPN20-211ENST00000466912 ATP6V0A2Q9Y487 856 aa12.64□□□□□ -0.39
PTPN20-211ENST00000466912 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 PLIN1O60240 522 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 RASSF7Q02833 373 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 ANKRD44Q8N8A2 993 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 MEIS3Q99687 375 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
PTPN20-211ENST00000466912 COL4A1P02462 1669 aa12.63□□□□□ -0.39
PTPN20-211ENST00000466912 ITGA6P23229 1130 aa12.62□□□□□ -0.39
PTPN20-211ENST00000466912 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
PTPN20-211ENST00000466912 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
PTPN20-211ENST00000466912 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
PTPN20-211ENST00000466912 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
PTPN20-211ENST00000466912 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
PTPN20-211ENST00000466912 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
PTPN20-211ENST00000466912 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
PTPN20-211ENST00000466912 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
PTPN20-211ENST00000466912 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
PTPN20-211ENST00000466912 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
PTPN20-211ENST00000466912 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-211ENST00000466912 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-211ENST00000466912 IFIT5Q13325 482 aaKnown RBP12.6□□□□□ -0.39
PTPN20-211ENST00000466912 PSMD1Q99460 953 aa12.6□□□□□ -0.39
PTPN20-211ENST00000466912 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-211ENST00000466912 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-211ENST00000466912 LAMB2P55268 1798 aa12.6□□□□□ -0.39
PTPN20-211ENST00000466912 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
PTPN20-211ENST00000466912 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 GNAI3P08754 354 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 LMNB1P20700 586 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 GPSM2P81274 684 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 C20orf194Q5TEA3 1177 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
PTPN20-211ENST00000466912 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
PTPN20-211ENST00000466912 MS4A1P11836 297 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.4
PTPN20-211ENST00000466912 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-211ENST00000466912 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 CCDC57Q2TAC2 916 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 MPNDQ8N594 471 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-211ENST00000466912 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-211ENST00000466912 ZNF277Q9NRM2 450 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-211ENST00000466912 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
PTPN20-211ENST00000466912 GNAI2P04899 355 aa12.57□□□□□ -0.4
PTPN20-211ENST00000466912 MVPQ14764 893 aaKnown RBP12.57□□□□□ -0.4
PTPN20-211ENST00000466912 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-211ENST00000466912 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-211ENST00000466912 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
PTPN20-211ENST00000466912 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms