RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 STARD13Q9Y3M8 1113 aa7.58□□□□□ -1.2
VPS13D-203ENST00000466732 MPSTP25325 297 aa7.57□□□□□ -1.2
VPS13D-203ENST00000466732 RASSF7Q02833 373 aa7.57□□□□□ -1.2
VPS13D-203ENST00000466732 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
VPS13D-203ENST00000466732 ATCAYQ86WG3 371 aa7.57□□□□□ -1.2
VPS13D-203ENST00000466732 DNAJB12Q9NXW2 375 aaKnown RBP7.57□□□□□ -1.2
VPS13D-203ENST00000466732 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
VPS13D-203ENST00000466732 ABL1P00519 1130 aa7.56□□□□□ -1.2
VPS13D-203ENST00000466732 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
VPS13D-203ENST00000466732 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
VPS13D-203ENST00000466732 DHX32Q7L7V1 743 aaKnown RBP7.56□□□□□ -1.2
VPS13D-203ENST00000466732 UBAP1LF5GYI3 381 aa7.55□□□□□ -1.2
VPS13D-203ENST00000466732 ALBP02768 609 aa7.55□□□□□ -1.2
VPS13D-203ENST00000466732 NPR3P17342 541 aa7.55□□□□□ -1.2
VPS13D-203ENST00000466732 EIF1AXP47813 144 aaKnown RBP7.55□□□□□ -1.2
VPS13D-203ENST00000466732 ZNF211Q13398 564 aaPredicted RBP7.55□□□□□ -1.2
VPS13D-203ENST00000466732 ANO2Q9NQ90 1003 aa7.55□□□□□ -1.2
VPS13D-203ENST00000466732 ZBTB42B2RXF5 422 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 M0R082 166 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 GNB5O14775 395 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
VPS13D-203ENST00000466732 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 NLRP13Q86W25 1043 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
VPS13D-203ENST00000466732 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
VPS13D-203ENST00000466732 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
VPS13D-203ENST00000466732 TLR7Q9NYK1 1049 aaKnown RBP7.54□□□□□ -1.2
VPS13D-203ENST00000466732 FNDC3AQ9Y2H6 1198 aaKnown RBP7.54□□□□□ -1.2
VPS13D-203ENST00000466732 PIK3R2O00459 728 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 MMP20O60882 483 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 FAM13AO94988 1023 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 GDF11O95390 407 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 SERPINB4P48594 390 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS13D-203ENST00000466732 PCSK7Q16549 785 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 ALKBH2Q6NS38 261 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 TMEM151AQ8N4L1 468 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 EDEM1Q92611 657 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 SUV39H2Q9H5I1 410 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 EGFL7Q9UHF1 273 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 NAGPAQ9UK23 515 aa7.53□□□□□ -1.2
VPS13D-203ENST00000466732 CPB1P15086 417 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 NRLP54845 237 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 GPLD1P80108 840 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 MLLT1Q03111 559 aaPredicted RBP7.52□□□□□ -1.21
VPS13D-203ENST00000466732 DNM1Q05193 864 aaKnown RBP7.52□□□□□ -1.21
VPS13D-203ENST00000466732 FAM35AQ86V20 835 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 TXNDC2Q86VQ3 553 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 TRIM11Q96F44 468 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
VPS13D-203ENST00000466732 ICMTO60725 284 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 PDGFAP04085 211 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 PSAPP07602 524 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 COL8A1P27658 744 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 MZF1P28698 734 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-203ENST00000466732 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-203ENST00000466732 PSAPL1Q6NUJ1 521 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 NUDT8Q8WV74 236 aa7.51□□□□□ -1.21
VPS13D-203ENST00000466732 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
VPS13D-203ENST00000466732 PCSK2P16519 638 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 SOX18P35713 384 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 PLAURQ03405 335 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 AAMPQ13685 434 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 GGNBP2Q9H3C7 697 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
VPS13D-203ENST00000466732 POLIQ9UNA4 740 aa7.5□□□□□ -1.21
VPS13D-203ENST00000466732 H3BRB1 525 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 FZD6O60353 706 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 LILRB5O75023 590 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
VPS13D-203ENST00000466732 NID1P14543 1247 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 PERM1Q5SV97 790 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 PDE12Q6L8Q7 609 aaKnown RBP7.49□□□□□ -1.21
VPS13D-203ENST00000466732 NSUN5Q96P11 429 aaKnown RBP7.49□□□□□ -1.21
VPS13D-203ENST00000466732 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 PLVAPQ9BX97 442 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 TUT1Q9H6E5 874 aaKnown RBP7.49□□□□□ -1.21
VPS13D-203ENST00000466732 NOP53Q9NZM5 478 aaKnown RBP7.49□□□□□ -1.21
VPS13D-203ENST00000466732 TMEM63CQ9P1W3 806 aa7.49□□□□□ -1.21
VPS13D-203ENST00000466732 LOC102724428A0A0B4J2F2 783 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 A6NHS1 94 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 J3QW42 95 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 RGS9O75916 674 aaPredicted RBP7.48□□□□□ -1.21
VPS13D-203ENST00000466732 BRD1O95696 1058 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 SIK1P57059 783 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 ECM1Q16610 540 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
VPS13D-203ENST00000466732 ELMSAN1Q6PJG2 1045 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 XKR5Q6UX68 686 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 ZNF438Q7Z4V0 828 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 GLYCTKQ8IVS8 523 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 OR13H1Q8NG92 308 aa7.48□□□□□ -1.21
VPS13D-203ENST00000466732 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
VPS13D-203ENST00000466732 ELP3Q9H9T3 547 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms