RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 DPP8Q6V1X1 898 aaPredicted RBP19.76■□□□□ 0.75
HMGXB4-206ENST00000466438 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
HMGXB4-206ENST00000466438 NUP98P52948 1817 aa19.76■□□□□ 0.75
HMGXB4-206ENST00000466438 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
HMGXB4-206ENST00000466438 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 C3orf67Q6ZVT6 689 aa19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 SAMD7Q7Z3H4 446 aa19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 DPF2Q92785 391 aa19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 DCPSQ96C86 337 aaKnown RBP19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 MKI67P46013 3256 aaKnown RBP19.75■□□□□ 0.75
HMGXB4-206ENST00000466438 RASAL3Q86YV0 1011 aa19.74■□□□□ 0.75
HMGXB4-206ENST00000466438 MAP3K15Q6ZN16 1313 aa19.74■□□□□ 0.75
HMGXB4-206ENST00000466438 YDJCA8MPS7 323 aa19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 GPTP24298 496 aa19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 TBC1D10BQ4KMP7 808 aaPredicted RBP19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 MPNDQ8N594 471 aa19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 ABCC4O15439 1325 aa19.73■□□□□ 0.75
HMGXB4-206ENST00000466438 POLR2AP24928 1970 aaKnown RBP19.72■□□□□ 0.75
HMGXB4-206ENST00000466438 NTSR2O95665 410 aa19.72■□□□□ 0.75
HMGXB4-206ENST00000466438 NOM1Q5C9Z4 860 aaKnown RBP19.72■□□□□ 0.75
HMGXB4-206ENST00000466438 NLRP3Q96P20 1036 aa19.72■□□□□ 0.75
HMGXB4-206ENST00000466438 LAMB4A4D0S4 1761 aa19.72■□□□□ 0.75
HMGXB4-206ENST00000466438 U2SURPO15042 1029 aaKnown RBP19.71■□□□□ 0.75
HMGXB4-206ENST00000466438 EGFRP00533 1210 aa19.71■□□□□ 0.75
HMGXB4-206ENST00000466438 SP8Q8IXZ3 490 aa19.71■□□□□ 0.75
HMGXB4-206ENST00000466438 COL3A1P02461 1466 aaPredicted RBP19.71■□□□□ 0.75
HMGXB4-206ENST00000466438 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
HMGXB4-206ENST00000466438 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
HMGXB4-206ENST00000466438 SULF1Q8IWU6 871 aa19.7■□□□□ 0.74
HMGXB4-206ENST00000466438 NGEFQ8N5V2 710 aa19.7■□□□□ 0.74
HMGXB4-206ENST00000466438 BBOX1O75936 387 aa19.69■□□□□ 0.74
HMGXB4-206ENST00000466438 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
HMGXB4-206ENST00000466438 GPR25O00155 361 aa19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 PSMD14O00487 310 aa19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 CDCA5Q96FF9 252 aa19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 DUOX1Q9NRD9 1551 aa19.68■□□□□ 0.74
HMGXB4-206ENST00000466438 FKBP1BP68106 108 aa19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 RBM26Q5T8P6 1007 aaKnown RBP19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 TTLL7Q6ZT98 887 aa19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 GGA3Q9NZ52 723 aa19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 PAPPA2Q9BXP8 1791 aa19.67■□□□□ 0.74
HMGXB4-206ENST00000466438 SLC10A5Q5PT55 438 aa19.66■□□□□ 0.74
HMGXB4-206ENST00000466438 ZBTB3Q9H5J0 574 aa19.66■□□□□ 0.74
HMGXB4-206ENST00000466438 KIF4BQ2VIQ3 1234 aa19.65■□□□□ 0.74
HMGXB4-206ENST00000466438 PARP10Q53GL7 1025 aa19.65■□□□□ 0.74
HMGXB4-206ENST00000466438 MCM10Q7L590 875 aa19.65■□□□□ 0.74
HMGXB4-206ENST00000466438 RTF1Q92541 710 aaKnown RBP19.65■□□□□ 0.74
HMGXB4-206ENST00000466438 HTTP42858 3142 aa19.65■□□□□ 0.74
HMGXB4-206ENST00000466438 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMGXB4-206ENST00000466438 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
HMGXB4-206ENST00000466438 GIGYF2Q6Y7W6 1299 aaKnown RBP19.64■□□□□ 0.73
HMGXB4-206ENST00000466438 POTEFA5A3E0 1075 aa19.63■□□□□ 0.73
HMGXB4-206ENST00000466438 FKTNO75072 461 aa19.63■□□□□ 0.73
HMGXB4-206ENST00000466438 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
HMGXB4-206ENST00000466438 ANKRD36CQ5JPF3 1778 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 RBBP6Q7Z6E9 1792 aaKnown RBP19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 TM4SF4P48230 202 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 UTP14AQ9BVJ6 771 aaKnown RBP19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 DBNDD1Q9H9R9 158 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 LAMB2P55268 1798 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
HMGXB4-206ENST00000466438 ASTN2O75129 1339 aaPredicted RBP19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 GRAPQ13588 217 aa19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 WASHC4Q2M389 1173 aa19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 DDX46Q7L014 1031 aaKnown RBP19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 TMC4Q7Z404 712 aa19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 COLQQ9Y215 455 aaPredicted RBP19.61■□□□□ 0.73
HMGXB4-206ENST00000466438 DLL1O00548 723 aa19.6■□□□□ 0.73
HMGXB4-206ENST00000466438 MYL6BP14649 208 aa19.6■□□□□ 0.73
HMGXB4-206ENST00000466438 DDX60Q8IY21 1712 aaKnown RBP19.59■□□□□ 0.73
HMGXB4-206ENST00000466438 RTL9Q8NET4 1388 aa19.59■□□□□ 0.73
HMGXB4-206ENST00000466438 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
HMGXB4-206ENST00000466438 SZT2Q5T011 3432 aa19.58■□□□□ 0.73
HMGXB4-206ENST00000466438 DCTN1Q14203 1278 aa19.58■□□□□ 0.72
HMGXB4-206ENST00000466438 ANGEL2Q5VTE6 544 aaKnown RBP19.58■□□□□ 0.72
HMGXB4-206ENST00000466438 ECE2O60344 883 aa19.57■□□□□ 0.72
HMGXB4-206ENST00000466438 SREBF2Q12772 1141 aa19.57■□□□□ 0.72
HMGXB4-206ENST00000466438 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
HMGXB4-206ENST00000466438 MOB2Q70IA6 237 aa19.57■□□□□ 0.72
HMGXB4-206ENST00000466438 CENPFP49454 3210 aa19.57■□□□□ 0.72
HMGXB4-206ENST00000466438 HTATSF1O43719 755 aaKnown RBP19.56■□□□□ 0.72
HMGXB4-206ENST00000466438 KCNQ5Q9NR82 932 aa19.56■□□□□ 0.72
HMGXB4-206ENST00000466438 BRCA2P51587 3418 aa19.56■□□□□ 0.72
HMGXB4-206ENST00000466438 PITPNM2Q9BZ72 1349 aa19.55■□□□□ 0.72
HMGXB4-206ENST00000466438 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
HMGXB4-206ENST00000466438 RIMBP2O15034 1052 aa19.55■□□□□ 0.72
HMGXB4-206ENST00000466438 VIL1P09327 827 aaKnown RBP19.55■□□□□ 0.72
HMGXB4-206ENST00000466438 HCLS1P14317 486 aaPredicted RBP19.55■□□□□ 0.72
HMGXB4-206ENST00000466438 SCARF1Q14162 830 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms