RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 FPGT-TNNI3KV9GXZ4 949 aa23.07■■□□□ 1.28
LIMS2-212ENST00000466410 MST1RQ04912 1400 aa23.07■■□□□ 1.28
LIMS2-212ENST00000466410 JCADQ9P266 1359 aa23.07■■□□□ 1.28
LIMS2-212ENST00000466410 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-212ENST00000466410 TTC5Q8N0Z6 440 aa23.07■■□□□ 1.28
LIMS2-212ENST00000466410 ATP5J2-PTCD1G3V325 749 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 CYP27B1O15528 508 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 RRP9O43818 475 aaKnown RBP23.06■■□□□ 1.28
LIMS2-212ENST00000466410 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
LIMS2-212ENST00000466410 CSB-PGBD3P0DP91 1061 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 ATP5JP18859 108 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 FAM173BQ6P4H8 233 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.06■■□□□ 1.28
LIMS2-212ENST00000466410 COL15A1P39059 1388 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 CHGBP05060 677 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 ANKRD1Q15327 319 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
LIMS2-212ENST00000466410 ADCY5O95622 1261 aa23.05■■□□□ 1.28
LIMS2-212ENST00000466410 TERF1P54274 439 aa23.05■■□□□ 1.28
LIMS2-212ENST00000466410 TTC6Q86TZ1 520 aa23.05■■□□□ 1.28
LIMS2-212ENST00000466410 HMG20BQ9P0W2 317 aa23.05■■□□□ 1.28
LIMS2-212ENST00000466410 STK3Q13188 491 aa23.04■■□□□ 1.28
LIMS2-212ENST00000466410 TSGA10IPQ3SY00 556 aa23.04■■□□□ 1.28
LIMS2-212ENST00000466410 RABL6Q3YEC7 729 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-212ENST00000466410 DCAF5Q96JK2 942 aa23.04■■□□□ 1.28
LIMS2-212ENST00000466410 ALDH8A1Q9H2A2 487 aaPredicted RBP23.04■■□□□ 1.28
LIMS2-212ENST00000466410 CHRNA2Q15822 529 aa23.04■■□□□ 1.28
LIMS2-212ENST00000466410 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
LIMS2-212ENST00000466410 A0A087WZG4 1122 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 FMNL2Q96PY5 1086 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 DBNDD2Q9BQY9 259 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 AFDNP55196 1824 aaKnown RBP23.03■■□□□ 1.28
LIMS2-212ENST00000466410 ATF3P18847 181 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 PDCP20941 246 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 KRT85P78386 507 aa23.03■■□□□ 1.28
LIMS2-212ENST00000466410 CCDC129Q6ZRS4 1044 aa23.02■■□□□ 1.28
LIMS2-212ENST00000466410 ZNF830Q96NB3 372 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-212ENST00000466410 DNAJC2Q99543 621 aaKnown RBP23.02■■□□□ 1.28
LIMS2-212ENST00000466410 SEC62Q99442 399 aaKnown RBP23.02■■□□□ 1.28
LIMS2-212ENST00000466410 KDM4AO75164 1064 aa23.01■■□□□ 1.27
LIMS2-212ENST00000466410 CHMP3Q9Y3E7 222 aa23.01■■□□□ 1.27
LIMS2-212ENST00000466410 COL18A1P39060 1754 aa23.01■■□□□ 1.27
LIMS2-212ENST00000466410 ZNF609O15014 1411 aa23.01■■□□□ 1.27
LIMS2-212ENST00000466410 PDIA4P13667 645 aaKnown RBP23■■□□□ 1.27
LIMS2-212ENST00000466410 KIAA2012Q0VF49 1180 aa23■■□□□ 1.27
LIMS2-212ENST00000466410 UBE2Q2Q8WVN8 375 aa23■■□□□ 1.27
LIMS2-212ENST00000466410 CASP7P55210 303 aa23■■□□□ 1.27
LIMS2-212ENST00000466410 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
LIMS2-212ENST00000466410 CABP4P57796 275 aa22.99■■□□□ 1.27
LIMS2-212ENST00000466410 LIG1P18858 919 aa22.99■■□□□ 1.27
LIMS2-212ENST00000466410 LMBR1LQ6UX01 489 aa22.99■■□□□ 1.27
LIMS2-212ENST00000466410 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
LIMS2-212ENST00000466410 NEK1Q96PY6 1258 aa22.99■■□□□ 1.27
LIMS2-212ENST00000466410 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
LIMS2-212ENST00000466410 AP5Z1O43299 807 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 PLCB2Q00722 1185 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 KRT32Q14532 448 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 HAUS7Q99871 368 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 TFIP11Q9UBB9 837 aaKnown RBP22.98■■□□□ 1.27
LIMS2-212ENST00000466410 ELP1O95163 1332 aa22.98■■□□□ 1.27
LIMS2-212ENST00000466410 TTC12Q9H892 705 aaPredicted RBP22.98■■□□□ 1.27
LIMS2-212ENST00000466410 JAK2O60674 1132 aa22.97■■□□□ 1.27
LIMS2-212ENST00000466410 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
LIMS2-212ENST00000466410 CYP21A2P08686 494 aa22.97■■□□□ 1.27
LIMS2-212ENST00000466410 MCMDC2Q4G0Z9 681 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 U3KPZ7 1027 aaPredicted RBP22.96■■□□□ 1.27
LIMS2-212ENST00000466410 UQCRHLA0A096LP55 91 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 UQCRHP07919 91 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 CAMK4Q16566 473 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 GTF3C6Q969F1 213 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 CCDC192P0DO97 292 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 Q6ZUG5 572 aa22.96■■□□□ 1.27
LIMS2-212ENST00000466410 RFX7Q2KHR2 1363 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 NBPF26B4DH59 902 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 FOXO4P98177 505 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 NBPF14Q5TI25 921 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 NBPF10Q6P3W6 841 aaKnown RBP22.95■■□□□ 1.26
LIMS2-212ENST00000466410 NBPF15Q8N660 670 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 XIRP1Q702N8 1843 aaKnown RBP22.95■■□□□ 1.26
LIMS2-212ENST00000466410 SPATA32Q96LK8 384 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 SCAND2PQ9GZW5 306 aaPredicted RBP22.95■■□□□ 1.26
LIMS2-212ENST00000466410 NUP62CLQ9H1M0 184 aa22.95■■□□□ 1.26
LIMS2-212ENST00000466410 DCCP43146 1447 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 ABCC6O95255 1503 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 SLFNL1Q499Z3 407 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 GLI3P10071 1580 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 RBM10P98175 930 aaKnown RBP22.94■■□□□ 1.26
LIMS2-212ENST00000466410 KBTBD3Q8NAB2 608 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 LEO1Q8WVC0 666 aaPredicted RBP22.94■■□□□ 1.26
LIMS2-212ENST00000466410 LRRC2Q9BYS8 371 aa22.94■■□□□ 1.26
LIMS2-212ENST00000466410 PKD1L3Q7Z443 1732 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 H7C1W4 665 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 MAP3K11Q16584 847 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 ATG9AQ7Z3C6 839 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 PIBF1Q8WXW3 757 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 DACT1Q9NYF0 836 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 HSP90B1P14625 803 aaKnown RBP22.93■■□□□ 1.26
LIMS2-212ENST00000466410 TTLL7Q6ZT98 887 aa22.93■■□□□ 1.26
LIMS2-212ENST00000466410 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms