RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 CUL4AQ13619 759 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 TNNI3KQ59H18 835 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 LMBR1LQ6UX01 489 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 ISCA1Q9BUE6 129 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 FPGT-TNNI3KV9GXZ4 949 aa22.09■■□□□ 1.13
LETM1-202ENST00000466175 TCIRG1Q13488 830 aa22.08■■□□□ 1.13
LETM1-202ENST00000466175 KLHDC4Q8TBB5 520 aa22.08■■□□□ 1.13
LETM1-202ENST00000466175 TMX3Q96JJ7 454 aa22.08■■□□□ 1.13
LETM1-202ENST00000466175 IL25Q9H293 177 aa22.08■■□□□ 1.13
LETM1-202ENST00000466175 ZBTB3Q9H5J0 574 aa22.07■■□□□ 1.12
LETM1-202ENST00000466175 CYP2E1P05181 493 aaPredicted RBP22.06■■□□□ 1.12
LETM1-202ENST00000466175 IL15P40933 162 aaPredicted RBP22.06■■□□□ 1.12
LETM1-202ENST00000466175 TFCP2Q12800 502 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 KCNB2Q92953 911 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 ASAP1Q9ULH1 1129 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 PLSCR1O15162 318 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 CIAO1O76071 339 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 SNX14Q9Y5W7 946 aa22.06■■□□□ 1.12
LETM1-202ENST00000466175 HSP90AB3PQ58FF7 597 aa22.05■■□□□ 1.12
LETM1-202ENST00000466175 DNAJC10Q8IXB1 793 aa22.05■■□□□ 1.12
LETM1-202ENST00000466175 PROM2Q8N271 834 aa22.05■■□□□ 1.12
LETM1-202ENST00000466175 JARID2Q92833 1246 aaPredicted RBP22.05■■□□□ 1.12
LETM1-202ENST00000466175 TM6SF1Q9BZW5 370 aa22.05■■□□□ 1.12
LETM1-202ENST00000466175 TLR7Q9NYK1 1049 aaKnown RBP22.05■■□□□ 1.12
LETM1-202ENST00000466175 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.05■■□□□ 1.12
LETM1-202ENST00000466175 RREB1Q92766 1687 aa22.04■■□□□ 1.12
LETM1-202ENST00000466175 SSFA2P28290 1259 aa22.04■■□□□ 1.12
LETM1-202ENST00000466175 KCNQ4P56696 695 aa22.04■■□□□ 1.12
LETM1-202ENST00000466175 FSD1Q9BTV5 496 aa22.04■■□□□ 1.12
LETM1-202ENST00000466175 RGPD3A6NKT7 1758 aaPredicted RBP22.04■■□□□ 1.12
LETM1-202ENST00000466175 RGPD4Q7Z3J3 1758 aa22.04■■□□□ 1.12
LETM1-202ENST00000466175 L1TD1Q5T7N2 865 aaKnown RBP22.03■■□□□ 1.12
LETM1-202ENST00000466175 PLA2G12BQ9BX93 195 aa22.03■■□□□ 1.12
LETM1-202ENST00000466175 BOLA2Q9H3K6 86 aa22.03■■□□□ 1.12
LETM1-202ENST00000466175 CCDC171Q6TFL3 1326 aa22.03■■□□□ 1.12
LETM1-202ENST00000466175 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
LETM1-202ENST00000466175 TXNRD1Q16881 649 aa22.02■■□□□ 1.12
LETM1-202ENST00000466175 DBNLQ9UJU6 430 aaKnown RBP22.02■■□□□ 1.12
LETM1-202ENST00000466175 CHMP3Q9Y3E7 222 aa22.02■■□□□ 1.12
LETM1-202ENST00000466175 MAP3K15Q6ZN16 1313 aa22.02■■□□□ 1.12
LETM1-202ENST00000466175 EYA2O00167 538 aa22.01■■□□□ 1.11
LETM1-202ENST00000466175 BAG4O95429 457 aaKnown RBP22.01■■□□□ 1.11
LETM1-202ENST00000466175 ZKSCAN1P17029 563 aaPredicted RBP22.01■■□□□ 1.11
LETM1-202ENST00000466175 NMIQ13287 307 aaPredicted RBP22.01■■□□□ 1.11
LETM1-202ENST00000466175 HAUS7Q99871 368 aa22.01■■□□□ 1.11
LETM1-202ENST00000466175 ISY1Q9ULR0 285 aaKnown RBP22.01■■□□□ 1.11
LETM1-202ENST00000466175 RNF20Q5VTR2 975 aa22■■□□□ 1.11
LETM1-202ENST00000466175 GIGYF2Q6Y7W6 1299 aaKnown RBP22■■□□□ 1.11
LETM1-202ENST00000466175 ATG9AQ7Z3C6 839 aa22■■□□□ 1.11
LETM1-202ENST00000466175 MAP4K1Q92918 833 aa22■■□□□ 1.11
LETM1-202ENST00000466175 TTC14Q96N46 770 aa22■■□□□ 1.11
LETM1-202ENST00000466175 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
LETM1-202ENST00000466175 CYP19A1P11511 503 aaPredicted RBP21.99■■□□□ 1.11
LETM1-202ENST00000466175 NECTIN1Q15223 517 aa21.99■■□□□ 1.11
LETM1-202ENST00000466175 ZGPATQ8N5A5 531 aaKnown RBP21.99■■□□□ 1.11
LETM1-202ENST00000466175 ZBTB38Q8NAP3 1195 aaPredicted RBP21.99■■□□□ 1.11
LETM1-202ENST00000466175 UPF3BQ9BZI7 483 aaKnown RBP21.99■■□□□ 1.11
LETM1-202ENST00000466175 MED23Q9ULK4 1368 aa21.99■■□□□ 1.11
LETM1-202ENST00000466175 LY75O60449 1722 aa21.99■■□□□ 1.11
LETM1-202ENST00000466175 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 PALLDQ8WX93 1383 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
LETM1-202ENST00000466175 PSMA5P28066 241 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 PTH1RQ03431 593 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 CCDC57Q2TAC2 916 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 VPS53Q5VIR6 699 aa21.98■■□□□ 1.11
LETM1-202ENST00000466175 SPEF2Q9C093 1822 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 ERVV-1B6SEH8 477 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 RASEFQ8IZ41 740 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 ZSWIM6Q9HCJ5 1215 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 LIMCH1Q9UPQ0 1083 aa21.97■■□□□ 1.11
LETM1-202ENST00000466175 IL6STP40189 918 aaPredicted RBP21.96■■□□□ 1.11
LETM1-202ENST00000466175 KCNJ4P48050 445 aa21.96■■□□□ 1.11
LETM1-202ENST00000466175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.96■■□□□ 1.11
LETM1-202ENST00000466175 ZSCAN31Q96LW9 406 aaPredicted RBP21.96■■□□□ 1.11
LETM1-202ENST00000466175 FAM227BQ96M60 508 aa21.96■■□□□ 1.11
LETM1-202ENST00000466175 DBNDD2Q9BQY9 259 aa21.96■■□□□ 1.11
LETM1-202ENST00000466175 AKAP2Q9Y2D5 859 aa21.96■■□□□ 1.11
LETM1-202ENST00000466175 RBM8AQ9Y5S9 174 aaKnown RBP21.96■■□□□ 1.11
LETM1-202ENST00000466175 CYP46A1Q9Y6A2 500 aa21.96■■□□□ 1.11
LETM1-202ENST00000466175 CSF1RP07333 972 aa21.95■■□□□ 1.1
LETM1-202ENST00000466175 PRPF40BQ6NWY9 871 aaKnown RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 ZNF330Q9Y3S2 320 aaPredicted RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 ZNF609O15014 1411 aa21.95■■□□□ 1.1
LETM1-202ENST00000466175 R3HDM1Q15032 1099 aaKnown RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 CREB3L3Q68CJ9 461 aa21.95■■□□□ 1.1
LETM1-202ENST00000466175 CCNL1Q9UK58 526 aaPredicted RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.95■■□□□ 1.1
LETM1-202ENST00000466175 CICQ96RK0 1608 aaPredicted RBP21.94■■□□□ 1.1
LETM1-202ENST00000466175 A0A0D9SFI3 127 aa21.94■■□□□ 1.1
LETM1-202ENST00000466175 CASTP20810 708 aaKnown RBP21.94■■□□□ 1.1
LETM1-202ENST00000466175 TSGA10IPQ3SY00 556 aa21.94■■□□□ 1.1
LETM1-202ENST00000466175 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
LETM1-202ENST00000466175 CEP126Q9P2H0 1117 aa21.94■■□□□ 1.1
LETM1-202ENST00000466175 GOLGA6L3A6NEY3 463 aa21.93■■□□□ 1.1
LETM1-202ENST00000466175 KBTBD3Q8NAB2 608 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms