RNA–Protein interactions for RNA: ENST00000466020.1

CLHC1-211, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-211ENST00000466020 RNF112Q9ULX5 631 aa3.11□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L15C9J2P7 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L10C9JJH3 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L13C9JLJ4 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L12C9JPN9 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L11C9JVI0 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L21D6R901 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L18D6R9N7 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L22D6RA61 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L17D6RBQ6 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L19D6RCP7 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L20D6RJB6 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 MICAL2O94851 1124 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 EGFRP00533 1210 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 CPB1P15086 417 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 EIF2AK2P19525 551 aaKnown RBP3.1□□□□□ -1.91
CLHC1-211ENST00000466020 ITGB7P26010 798 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 SOX18P35713 384 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 USP17L24Q0WX57 530 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 DPYDQ12882 1025 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 PTK7Q13308 1070 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 DGKZQ13574 1117 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 C8orf86Q6ZUL3 223 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 FAM200AQ8TCP9 573 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 ADAMTS19Q8TE59 1207 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 WFDC12Q8WWY7 111 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 PPP1R12CQ9BZL4 782 aa3.1□□□□□ -1.91
CLHC1-211ENST00000466020 FNDC3AQ9Y2H6 1198 aaKnown RBP3.1□□□□□ -1.91
CLHC1-211ENST00000466020 A6NJR5 290 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 XYLBO75191 536 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 DKK1O94907 266 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 HOXD8P13378 290 aaPredicted RBP3.09□□□□□ -1.91
CLHC1-211ENST00000466020 WEE1P30291 646 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 SWI5Q1ZZU3 235 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 TMEM132AQ24JP5 1023 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 PERM1Q5SV97 790 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 FAM117BQ6P1L5 589 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 TMEM130Q8N3G9 435 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 SPACA7Q96KW9 195 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 LPIN3Q9BQK8 851 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 CEP41Q9BYV8 373 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 SMG9Q9H0W8 520 aaKnown RBP3.09□□□□□ -1.91
CLHC1-211ENST00000466020 AKTIPQ9H8T0 292 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 TLR7Q9NYK1 1049 aaKnown RBP3.09□□□□□ -1.91
CLHC1-211ENST00000466020 DMGDHQ9UI17 866 aaKnown RBP3.09□□□□□ -1.91
CLHC1-211ENST00000466020 NAGPAQ9UK23 515 aa3.09□□□□□ -1.91
CLHC1-211ENST00000466020 PAX4O43316 350 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 EIF4EBP3O60516 100 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 RPLP1P05386 114 aaKnown RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 RFX1P22670 979 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 BRD2P25440 801 aaKnown RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 LMOD1P29536 600 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 GRIK1P39086 918 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 IREB2P48200 963 aaKnown RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 UVSSAQ2YD98 709 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 CRTC2Q53ET0 693 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 KANK4Q5T7N3 995 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 SHISA2Q6UWI4 295 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 PRR23CQ6ZRP0 262 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 KRT25Q7Z3Z0 450 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 FNBP4Q8N3X1 1017 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 PIK3R5Q8WYR1 880 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 COL26A1Q96A83 441 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 PLD4Q96BZ4 506 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 IFT43Q96FT9 208 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 SSBP4Q9BWG4 385 aaPredicted RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 KLK14Q9P0G3 267 aa3.08□□□□□ -1.92
CLHC1-211ENST00000466020 RTCBQ9Y3I0 505 aaKnown RBP3.08□□□□□ -1.92
CLHC1-211ENST00000466020 LOC102724428A0A0B4J2F2 783 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 DLL1O00548 723 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 DHX15O43143 795 aaKnown RBP3.07□□□□□ -1.92
CLHC1-211ENST00000466020 HYAL3O43820 417 aaPredicted RBP3.07□□□□□ -1.92
CLHC1-211ENST00000466020 SMNDC1O75940 238 aaKnown RBP eCLIP3.07□□□□□ -1.92
CLHC1-211ENST00000466020 SASH3O75995 380 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 NOS3P29474 1203 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 SIK1P57059 783 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 ILDR2Q71H61 639 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 NLRP13Q86W25 1043 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 QTRT2Q9H974 415 aaKnown RBP3.07□□□□□ -1.92
CLHC1-211ENST00000466020 PCMTD2Q9NV79 361 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 BCS1LQ9Y276 419 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 PPME1Q9Y570 386 aa3.07□□□□□ -1.92
CLHC1-211ENST00000466020 PCSK2P16519 638 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 FSTP19883 344 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 TARSP26639 723 aaKnown RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 TXKP42681 527 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 CABP4P57796 275 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 HYAL2Q12891 473 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 GRIK5Q16478 980 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 FOXD4L6Q3SYB3 417 aaPredicted RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 TTC39BQ5VTQ0 682 aaPredicted RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 C16orf46Q6P387 395 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 INTS5Q6P9B9 1019 aaKnown RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 FOXD4L3Q6VB84 417 aaPredicted RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 TREML1Q86YW5 311 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 DZIP1LQ8IYY4 767 aaKnown RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 RGL4Q8IZJ4 473 aa3.06□□□□□ -1.92
CLHC1-211ENST00000466020 CMTR1Q8N1G2 835 aaKnown RBP3.06□□□□□ -1.92
CLHC1-211ENST00000466020 IL22RA1Q8N6P7 574 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms