RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 TXLNAP40222 546 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 FOXK2Q01167 660 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 FAM50AQ14320 339 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 GPAT2Q6NUI2 795 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 USP17L2Q6R6M4 530 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 GOLGA6L1Q8N7Z2 621 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 RRP7BPQ9NSQ0 103 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 ZMYM3Q14202 1370 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 DUOX2Q9NRD8 1548 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
EXOSC3-204ENST00000465860 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 ATP9BO43861 1147 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 TNP2Q05952 138 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 TMEM132AQ24JP5 1023 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 TBCELQ5QJ74 424 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 TNS4Q8IZW8 715 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 TPCN2Q8NHX9 752 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 DCAF5Q96JK2 942 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 KIF15Q9NS87 1388 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 NCOA1Q15788 1441 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 CNTLNQ9NXG0 1405 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 KDM5DQ9BY66 1539 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 MYO3AQ8NEV4 1616 aa7.4□□□□□ -1.22
EXOSC3-204ENST00000465860 CAMSAP1Q5T5Y3 1602 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 ABCC3O15438 1527 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 ADGRL2O95490 1459 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 KHNYNO15037 678 aaKnown RBP7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 CLDN10P78369 228 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 TEAD4Q15561 434 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 TRIM50Q86XT4 487 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 SLC9A9Q8IVB4 645 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 L3MBTL2Q969R5 705 aa7.39□□□□□ -1.23
EXOSC3-204ENST00000465860 ZNF142P52746 1687 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 ZC3H13Q5T200 1668 aaKnown RBP7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 PRDM15P57071 1507 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 ARAFP10398 606 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 CD33P20138 364 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 NOS2P35228 1153 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 BICDL1Q6ZP65 573 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 FNBP4Q8N3X1 1017 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 GJA3Q9Y6H8 435 aa7.38□□□□□ -1.23
EXOSC3-204ENST00000465860 ERBINQ96RT1 1412 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 ITGB2P05107 769 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 FAM157BP0CG42 384 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 EPXP11678 715 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 RRAGCQ9HB90 399 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 VWDEQ8N2E2 1590 aa7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 CEP170BQ9Y4F5 1589 aaPredicted RBP7.37□□□□□ -1.23
EXOSC3-204ENST00000465860 PZPP20742 1482 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 NPATQ14207 1427 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 UHRF1BP1Q6BDS2 1440 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 WASHC2CQ9Y4E1 1318 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 EML1O00423 815 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 IGHA1P01876 353 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 ITGAEP38570 1179 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 SUZ12Q15022 739 aaKnown RBP7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 PROSER2Q86WR7 435 aaPredicted RBP7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 OGFOD1Q8N543 542 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 C7orf43Q8WVR3 580 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 FAM135AQ9P2D6 1515 aa7.36□□□□□ -1.23
EXOSC3-204ENST00000465860 RRBP1Q9P2E9 1410 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 ANKRD30AQ9BXX3 1397 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 SERTM1A2A2V5 107 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 EFSO43281 561 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 AMPD1P23109 780 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 LARGE2Q8N3Y3 721 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 GLMNQ92990 594 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 TSPAN10Q9H1Z9 355 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-204ENST00000465860 SPATA31D1Q6ZQQ2 1576 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 DKK1O94907 266 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 COL8A1P27658 744 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 LINC00114Q6XXX2 140 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 LRRC69Q6ZNQ3 347 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 FCHSD1Q86WN1 690 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 ZNF594Q96JF6 807 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
EXOSC3-204ENST00000465860 UNC13BO14795 1591 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms