RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 COL4A1P02462 1669 aa11.35□□□□□ -0.59
GABRE-205ENST00000465405 FSTL1Q12841 308 aa11.34□□□□□ -0.59
GABRE-205ENST00000465405 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
GABRE-205ENST00000465405 G2E3Q7L622 706 aa11.34□□□□□ -0.59
GABRE-205ENST00000465405 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
GABRE-205ENST00000465405 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
GABRE-205ENST00000465405 FZD9O00144 591 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 APLP1P51693 650 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 HTRA3P83110 453 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 GRAPQ13588 217 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
GABRE-205ENST00000465405 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 SMC1BQ8NDV3 1235 aa11.33□□□□□ -0.6
GABRE-205ENST00000465405 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
GABRE-205ENST00000465405 JARID2Q92833 1246 aaPredicted RBP11.33□□□□□ -0.6
GABRE-205ENST00000465405 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 IRS4O14654 1257 aaPredicted RBP11.32□□□□□ -0.6
GABRE-205ENST00000465405 BBOX1O75936 387 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 DDX58O95786 925 aaKnown RBP11.32□□□□□ -0.6
GABRE-205ENST00000465405 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
GABRE-205ENST00000465405 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
GABRE-205ENST00000465405 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
GABRE-205ENST00000465405 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
GABRE-205ENST00000465405 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
GABRE-205ENST00000465405 AOC3Q16853 763 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
GABRE-205ENST00000465405 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
GABRE-205ENST00000465405 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
GABRE-205ENST00000465405 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
GABRE-205ENST00000465405 SCN4AP35499 1836 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 LRRC37AA6NMS7 1700 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 VAMP4O75379 141 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
GABRE-205ENST00000465405 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 DPP8Q6V1X1 898 aaPredicted RBP11.3□□□□□ -0.6
GABRE-205ENST00000465405 MPNDQ8N594 471 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 DNAJC5GQ8N7S2 189 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
GABRE-205ENST00000465405 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
GABRE-205ENST00000465405 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
GABRE-205ENST00000465405 CEP350Q5VT06 3117 aa11.3□□□□□ -0.6
GABRE-205ENST00000465405 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
GABRE-205ENST00000465405 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
GABRE-205ENST00000465405 GPC2Q8N158 579 aa11.29□□□□□ -0.6
GABRE-205ENST00000465405 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
GABRE-205ENST00000465405 GJA3Q9Y6H8 435 aa11.29□□□□□ -0.6
GABRE-205ENST00000465405 LTBP1Q14766 1721 aa11.29□□□□□ -0.6
GABRE-205ENST00000465405 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 PDE8AO60658 829 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 FLIIQ13045 1269 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
GABRE-205ENST00000465405 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
GABRE-205ENST00000465405 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 EPHX2P34913 555 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
GABRE-205ENST00000465405 GPSM2P81274 684 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
GABRE-205ENST00000465405 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
GABRE-205ENST00000465405 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
GABRE-205ENST00000465405 ZNF521Q96K83 1311 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
GABRE-205ENST00000465405 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 EPS15P42566 896 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 SCNN1DP51172 638 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 CXCL9Q07325 125 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 GPR101Q96P66 508 aaPredicted RBP11.26□□□□□ -0.61
GABRE-205ENST00000465405 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 POLLQ9UGP5 575 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
GABRE-205ENST00000465405 YDJCA8MPS7 323 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 H7C1W4 665 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
GABRE-205ENST00000465405 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
GABRE-205ENST00000465405 F6X3S4 739 aa11.24□□□□□ -0.61
GABRE-205ENST00000465405 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
GABRE-205ENST00000465405 RAD17O75943 681 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms