RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
HDAC6-214ENST00000465269 AKAP11Q9UKA4 1901 aa20.06■□□□□ 0.8
HDAC6-214ENST00000465269 MYL6BP14649 208 aa20.05■□□□□ 0.8
HDAC6-214ENST00000465269 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
HDAC6-214ENST00000465269 RTFDC1Q9BY42 306 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-214ENST00000465269 HTTP42858 3142 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 H7C1D1 291 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 TNIP1Q15025 636 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 C2orf69Q8N8R5 385 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 CCDC102AQ96A19 550 aa20.04■□□□□ 0.8
HDAC6-214ENST00000465269 ASTN2O75129 1339 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-214ENST00000465269 CDHR2Q9BYE9 1310 aa20.03■□□□□ 0.8
HDAC6-214ENST00000465269 SLC10A3P09131 477 aa20.03■□□□□ 0.8
HDAC6-214ENST00000465269 ZNF34Q8IZ26 560 aa20.03■□□□□ 0.8
HDAC6-214ENST00000465269 MPNDQ8N594 471 aa20.03■□□□□ 0.8
HDAC6-214ENST00000465269 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-214ENST00000465269 KIF6Q6ZMV9 814 aa20.02■□□□□ 0.8
HDAC6-214ENST00000465269 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
HDAC6-214ENST00000465269 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
HDAC6-214ENST00000465269 ZNF428Q96B54 188 aa20.02■□□□□ 0.8
HDAC6-214ENST00000465269 VPS33BQ9H267 617 aa20.02■□□□□ 0.8
HDAC6-214ENST00000465269 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-214ENST00000465269 CENPFP49454 3210 aa20.02■□□□□ 0.79
HDAC6-214ENST00000465269 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
HDAC6-214ENST00000465269 PSMD14O00487 310 aa20.01■□□□□ 0.79
HDAC6-214ENST00000465269 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-214ENST00000465269 HABP4Q5JVS0 413 aaKnown RBP20.01■□□□□ 0.79
HDAC6-214ENST00000465269 NLRP3Q96P20 1036 aa20.01■□□□□ 0.79
HDAC6-214ENST00000465269 KCNQ5Q9NR82 932 aa20.01■□□□□ 0.79
HDAC6-214ENST00000465269 TAF1P21675 1872 aa20.01■□□□□ 0.79
HDAC6-214ENST00000465269 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
HDAC6-214ENST00000465269 DBNDD1Q9H9R9 158 aa20■□□□□ 0.79
HDAC6-214ENST00000465269 TBC1D8O95759 1140 aa19.99■□□□□ 0.79
HDAC6-214ENST00000465269 HCLS1P14317 486 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-214ENST00000465269 RASAL3Q86YV0 1011 aa19.99■□□□□ 0.79
HDAC6-214ENST00000465269 ZNF296Q8WUU4 475 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-214ENST00000465269 SP8Q8IXZ3 490 aa19.98■□□□□ 0.79
HDAC6-214ENST00000465269 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
HDAC6-214ENST00000465269 HDAC9Q9UKV0 1011 aa19.98■□□□□ 0.79
HDAC6-214ENST00000465269 LAMB2P55268 1798 aa19.98■□□□□ 0.79
HDAC6-214ENST00000465269 RIMBP2O15034 1052 aa19.97■□□□□ 0.79
HDAC6-214ENST00000465269 MOB2Q70IA6 237 aa19.97■□□□□ 0.79
HDAC6-214ENST00000465269 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
HDAC6-214ENST00000465269 TIMELESSQ9UNS1 1208 aa19.97■□□□□ 0.79
HDAC6-214ENST00000465269 BRCA2P51587 3418 aa19.96■□□□□ 0.79
HDAC6-214ENST00000465269 SZT2Q5T011 3432 aa19.96■□□□□ 0.79
HDAC6-214ENST00000465269 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-214ENST00000465269 GIGYF2Q6Y7W6 1299 aaKnown RBP19.96■□□□□ 0.79
HDAC6-214ENST00000465269 PPP1R42Q7Z4L9 355 aa19.96■□□□□ 0.79
HDAC6-214ENST00000465269 CDCA5Q96FF9 252 aa19.96■□□□□ 0.79
HDAC6-214ENST00000465269 GGA3Q9NZ52 723 aa19.96■□□□□ 0.79
HDAC6-214ENST00000465269 SCAF8Q9UPN6 1271 aaKnown RBP19.96■□□□□ 0.79
HDAC6-214ENST00000465269 DPF2Q92785 391 aa19.95■□□□□ 0.78
HDAC6-214ENST00000465269 UTP14AQ9BVJ6 771 aaKnown RBP19.95■□□□□ 0.78
HDAC6-214ENST00000465269 BBOX1O75936 387 aa19.94■□□□□ 0.78
HDAC6-214ENST00000465269 DOK7Q18PE1 504 aa19.94■□□□□ 0.78
HDAC6-214ENST00000465269 SLC10A5Q5PT55 438 aa19.94■□□□□ 0.78
HDAC6-214ENST00000465269 GCC1Q96CN9 775 aa19.94■□□□□ 0.78
HDAC6-214ENST00000465269 RTL9Q8NET4 1388 aa19.94■□□□□ 0.78
HDAC6-214ENST00000465269 ANXA1P04083 346 aa19.93■□□□□ 0.78
HDAC6-214ENST00000465269 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-214ENST00000465269 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
HDAC6-214ENST00000465269 KIF4BQ2VIQ3 1234 aa19.93■□□□□ 0.78
HDAC6-214ENST00000465269 COL4A1P02462 1669 aa19.92■□□□□ 0.78
HDAC6-214ENST00000465269 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
HDAC6-214ENST00000465269 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-214ENST00000465269 SULF1Q8IWU6 871 aa19.92■□□□□ 0.78
HDAC6-214ENST00000465269 R3HDMLQ9H3Y0 253 aa19.92■□□□□ 0.78
HDAC6-214ENST00000465269 CEP290O15078 2479 aa19.91■□□□□ 0.78
HDAC6-214ENST00000465269 MKRN3Q13064 507 aaKnown RBP19.91■□□□□ 0.78
HDAC6-214ENST00000465269 GRAPQ13588 217 aa19.91■□□□□ 0.78
HDAC6-214ENST00000465269 PKN2Q16513 984 aaKnown RBP19.91■□□□□ 0.78
HDAC6-214ENST00000465269 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
HDAC6-214ENST00000465269 DDX46Q7L014 1031 aaKnown RBP19.91■□□□□ 0.78
HDAC6-214ENST00000465269 GRAPLQ8TC17 118 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-214ENST00000465269 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
HDAC6-214ENST00000465269 ECE2O60344 883 aa19.9■□□□□ 0.78
HDAC6-214ENST00000465269 WASHC4Q2M389 1173 aa19.9■□□□□ 0.78
HDAC6-214ENST00000465269 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
HDAC6-214ENST00000465269 POTEFA5A3E0 1075 aa19.89■□□□□ 0.77
HDAC6-214ENST00000465269 UBE2Q2LH0YL09 131 aa19.89■□□□□ 0.77
HDAC6-214ENST00000465269 FXR1P51114 621 aaKnown RBP eCLIP19.89■□□□□ 0.77
HDAC6-214ENST00000465269 ANGEL2Q5VTE6 544 aaKnown RBP19.89■□□□□ 0.77
HDAC6-214ENST00000465269 PRAMEF18Q5VWM3 479 aa19.89■□□□□ 0.77
HDAC6-214ENST00000465269 FBXO46Q6PJ61 603 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-214ENST00000465269 POLLQ9UGP5 575 aa19.89■□□□□ 0.77
HDAC6-214ENST00000465269 NSFL1CQ9UNZ2 370 aaKnown RBP19.89■□□□□ 0.77
HDAC6-214ENST00000465269 SCN9AQ15858 1988 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 GPR25O00155 361 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 LRP10Q7Z4F1 713 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 TRIOBPQ9H2D6 2365 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 ANKRD36CQ5JPF3 1778 aa19.88■□□□□ 0.77
HDAC6-214ENST00000465269 A0A0C4DFX4 3053 aa19.87■□□□□ 0.77
HDAC6-214ENST00000465269 GPSM2P81274 684 aa19.87■□□□□ 0.77
HDAC6-214ENST00000465269 NLRP10Q86W26 655 aa19.87■□□□□ 0.77
HDAC6-214ENST00000465269 LRRC37AA6NMS7 1700 aa19.87■□□□□ 0.77
HDAC6-214ENST00000465269 KIAA0100Q14667 2235 aaKnown RBP19.87■□□□□ 0.77
HDAC6-214ENST00000465269 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms