RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 MBIPQ9NS73 344 aa8.56□□□□□ -1.04
RBM39-225ENST00000465158 SUPT16HQ9Y5B9 1047 aaKnown RBP8.56□□□□□ -1.04
RBM39-225ENST00000465158 BCL9LQ86UU0 1499 aa8.56□□□□□ -1.04
RBM39-225ENST00000465158 TNS2Q63HR2 1409 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 SHANK3Q9BYB0 1731 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 EXOSC9Q06265 439 aaKnown RBP8.55□□□□□ -1.04
RBM39-225ENST00000465158 TWISTNBQ3B726 338 aaPredicted RBP8.55□□□□□ -1.04
RBM39-225ENST00000465158 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 MRC1P22897 1456 aa8.55□□□□□ -1.04
RBM39-225ENST00000465158 ITGB4P16144 1822 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 CYP27B1O15528 508 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 FOXC1Q12948 553 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 DCTN1Q14203 1278 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 PDE3AQ14432 1141 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 ARHGAP45Q92619 1136 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 SPSB2Q99619 263 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 STK31Q9BXU1 1019 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
RBM39-225ENST00000465158 AFF2P51816 1311 aa8.54□□□□□ -1.04
RBM39-225ENST00000465158 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 RRP1P56182 461 aaKnown RBP8.53□□□□□ -1.04
RBM39-225ENST00000465158 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
RBM39-225ENST00000465158 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
RBM39-225ENST00000465158 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 TMOD3Q9NYL9 352 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 PKD2L1Q9P0L9 805 aa8.53□□□□□ -1.04
RBM39-225ENST00000465158 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 VAMP4O75379 141 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 ZNF790Q6PG37 636 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 SMC4Q9NTJ3 1288 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 ATRNO75882 1429 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 PTPRCP08575 1304 aa8.52□□□□□ -1.05
RBM39-225ENST00000465158 ZMYND10O75800 440 aa8.51□□□□□ -1.05
RBM39-225ENST00000465158 EIF4A1P60842 406 aaKnown RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 ZKSCAN2Q63HK3 967 aa8.51□□□□□ -1.05
RBM39-225ENST00000465158 RDH13Q8NBN7 331 aa8.51□□□□□ -1.05
RBM39-225ENST00000465158 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 API5Q9BZZ5 524 aaKnown RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 BCL9O00512 1426 aa8.51□□□□□ -1.05
RBM39-225ENST00000465158 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
RBM39-225ENST00000465158 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
RBM39-225ENST00000465158 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
RBM39-225ENST00000465158 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
RBM39-225ENST00000465158 SNRPA1P09661 255 aaKnown RBP8.5□□□□□ -1.05
RBM39-225ENST00000465158 GCGRP47871 477 aa8.5□□□□□ -1.05
RBM39-225ENST00000465158 RPIAP49247 311 aa8.5□□□□□ -1.05
RBM39-225ENST00000465158 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
RBM39-225ENST00000465158 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
RBM39-225ENST00000465158 DBF4Q9UBU7 674 aaPredicted RBP8.5□□□□□ -1.05
RBM39-225ENST00000465158 HEG1Q9ULI3 1381 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 LAMB4A4D0S4 1761 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
RBM39-225ENST00000465158 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
RBM39-225ENST00000465158 C8orf58Q8NAV2 365 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 SSH1Q8WYL5 1049 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
RBM39-225ENST00000465158 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 DDX58O95786 925 aaKnown RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
RBM39-225ENST00000465158 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 FRAT1Q92837 279 aaPredicted RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 MIS18AQ9NYP9 233 aa8.48□□□□□ -1.05
RBM39-225ENST00000465158 FCF1Q9Y324 198 aaKnown RBP8.48□□□□□ -1.05
RBM39-225ENST00000465158 DOT1LQ8TEK3 1739 aa8.48□□□□□ -1.05
RBM39-225ENST00000465158 GLI3P10071 1580 aa8.48□□□□□ -1.05
RBM39-225ENST00000465158 ELL2O00472 640 aaPredicted RBP8.47□□□□□ -1.05
RBM39-225ENST00000465158 BCAR3O75815 825 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 STARD3NLO95772 234 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 AVPP01185 164 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
RBM39-225ENST00000465158 CYP4X1Q8N118 509 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 TOR4AQ9NXH8 423 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 DDX19BQ9UMR2 479 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 SBF2Q86WG5 1849 aa8.47□□□□□ -1.05
RBM39-225ENST00000465158 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms