RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 GRAPLQ8TC17 118 aaPredicted RBP15.59■□□□□ 0.09
XRN1-204ENST00000465074 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
XRN1-204ENST00000465074 CCER2I3L3R5 266 aa15.58■□□□□ 0.08
XRN1-204ENST00000465074 DIEXFQ68CQ4 756 aaKnown RBP15.58■□□□□ 0.08
XRN1-204ENST00000465074 DPP8Q6V1X1 898 aaPredicted RBP15.58■□□□□ 0.08
XRN1-204ENST00000465074 LARGE2Q8N3Y3 721 aa15.58■□□□□ 0.08
XRN1-204ENST00000465074 CACNA1FO60840 1977 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 PCCAP05165 728 aaPredicted RBP15.57■□□□□ 0.08
XRN1-204ENST00000465074 IGKV5-2P06315 115 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
XRN1-204ENST00000465074 SP8Q8IXZ3 490 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 MPNDQ8N594 471 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
XRN1-204ENST00000465074 PSMD1Q99460 953 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 GJA3Q9Y6H8 435 aa15.57■□□□□ 0.08
XRN1-204ENST00000465074 PPIP5K2O43314 1243 aa15.56■□□□□ 0.08
XRN1-204ENST00000465074 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
XRN1-204ENST00000465074 AOC3Q16853 763 aa15.56■□□□□ 0.08
XRN1-204ENST00000465074 GRIPAP1Q4V328 841 aa15.56■□□□□ 0.08
XRN1-204ENST00000465074 ZNF541Q9H0D2 1346 aa15.56■□□□□ 0.08
XRN1-204ENST00000465074 NEURL1BA8MQ27 555 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 F6X3S4 739 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 PDE8AO60658 829 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 HSPA6P17066 643 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 EIF6P56537 245 aaKnown RBP15.55■□□□□ 0.08
XRN1-204ENST00000465074 UBE3BQ7Z3V4 1068 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 NIM1KQ8IY84 436 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 MIER1Q8N108 512 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 SUPT20HQ8NEM7 779 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 RBM46Q8TBY0 533 aaKnown RBP15.55■□□□□ 0.08
XRN1-204ENST00000465074 DNAAF4Q8WXU2 420 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 SEC31BQ9NQW1 1179 aa15.55■□□□□ 0.08
XRN1-204ENST00000465074 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
XRN1-204ENST00000465074 ZNF521Q96K83 1311 aa15.54■□□□□ 0.08
XRN1-204ENST00000465074 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
XRN1-204ENST00000465074 CCDC152Q4G0S7 254 aa15.54■□□□□ 0.08
XRN1-204ENST00000465074 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
XRN1-204ENST00000465074 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
XRN1-204ENST00000465074 POTECB2RU33 542 aa15.53■□□□□ 0.08
XRN1-204ENST00000465074 E9PSI1 815 aa15.53■□□□□ 0.08
XRN1-204ENST00000465074 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
XRN1-204ENST00000465074 SLC4A10Q6U841 1118 aa15.53■□□□□ 0.08
XRN1-204ENST00000465074 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 COL4A1P02462 1669 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 COL4A5P29400 1685 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 RIMBP2O15034 1052 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
XRN1-204ENST00000465074 TMC4Q7Z404 712 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
XRN1-204ENST00000465074 SPEF2Q9C093 1822 aa15.52■□□□□ 0.07
XRN1-204ENST00000465074 MYH3P11055 1940 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 FZD9O00144 591 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 CTSWP56202 376 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 GPSM2P81274 684 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 SLFN5Q08AF3 891 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 FSTL1Q12841 308 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 GCKRQ14397 625 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 ANKIB1Q9P2G1 1089 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 CLEC11AQ9Y240 323 aa15.51■□□□□ 0.07
XRN1-204ENST00000465074 IQCA1LA6NCM1 817 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 ANKRD18AQ8IVF6 992 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 GPC2Q8N158 579 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 GPR101Q96P66 508 aaPredicted RBP15.5■□□□□ 0.07
XRN1-204ENST00000465074 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 HACL1Q9UJ83 578 aa15.5■□□□□ 0.07
XRN1-204ENST00000465074 G3V3G9 751 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 H7C1W4 665 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 POTEIP0CG38 1075 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 POTEJP0CG39 1038 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 DCAF8Q5TAQ9 597 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 RTFDC1Q9BY42 306 aaPredicted RBP15.49■□□□□ 0.07
XRN1-204ENST00000465074 GREM2Q9H772 168 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 CHMP3Q9Y3E7 222 aa15.49■□□□□ 0.07
XRN1-204ENST00000465074 LRRC37AA6NMS7 1700 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 SCN4AP35499 1836 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 RAD17O75943 681 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 LMOD1P29536 600 aaPredicted RBP15.48■□□□□ 0.07
XRN1-204ENST00000465074 APLP1P51693 650 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 HTRA3P83110 453 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 TTLL11Q8NHH1 800 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
XRN1-204ENST00000465074 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
XRN1-204ENST00000465074 ZNRF3Q9ULT6 936 aa15.48■□□□□ 0.07
XRN1-204ENST00000465074 UFL1O94874 794 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 EPHX2P34913 555 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 KIAA2012Q0VF49 1180 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 BEND3Q5T5X7 828 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
XRN1-204ENST00000465074 L3MBTL3Q96JM7 780 aaPredicted RBP15.47■□□□□ 0.07
XRN1-204ENST00000465074 VPS33BQ9H267 617 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 DBNDD1Q9H9R9 158 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
XRN1-204ENST00000465074 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
XRN1-204ENST00000465074 CXCL9Q07325 125 aa15.46■□□□□ 0.07
XRN1-204ENST00000465074 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms