RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 PRELPP51888 382 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 GNAI3P08754 354 aa11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 TRMT112Q9UI30 125 aaKnown RBP11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 CHD4Q14839 1912 aa11.27□□□□□ -0.61
NUDCD3-204ENST00000464812 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 SLX4Q8IY92 1834 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 GNAI2P04899 355 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 FOXO4P98177 505 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 ERFEQ4G0M1 354 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 SETDB2Q96T68 719 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 UTP14AQ9BVJ6 771 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 SH3TC1Q8TE82 1336 aa11.26□□□□□ -0.61
NUDCD3-204ENST00000464812 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NUDCD3-204ENST00000464812 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-204ENST00000464812 TGFB2P61812 414 aa11.25□□□□□ -0.61
NUDCD3-204ENST00000464812 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
NUDCD3-204ENST00000464812 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 IRS4O14654 1257 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 IGHDP01880 384 aa11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
NUDCD3-204ENST00000464812 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 SBF1O95248 1867 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 MTX1Q13505 466 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 AAMPQ13685 434 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 KDM2BQ8NHM5 1336 aa11.23□□□□□ -0.61
NUDCD3-204ENST00000464812 CTSWP56202 376 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 POLA2Q14181 598 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 GPR162Q16538 588 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 LMBR1LQ6UX01 489 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 CCDC85AQ96PX6 553 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-204ENST00000464812 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 ARAP2Q8WZ64 1704 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 PDE8AO60658 829 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 CSF1RP07333 972 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 OLFM4Q6UX06 510 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 C2CD5Q86YS7 1000 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 KLHDC4Q8TBB5 520 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 SSH3Q8TE77 659 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
NUDCD3-204ENST00000464812 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
NUDCD3-204ENST00000464812 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 SRGNP10124 158 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 TPTE2Q6XPS3 522 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 RPAP2Q8IXW5 612 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 GREM2Q9H772 168 aa11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-204ENST00000464812 NFKBIEO00221 500 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 CCDC136Q96JN2 1154 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 CHMP3Q9Y3E7 222 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 COL4A5P29400 1685 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 CCDC88AQ3V6T2 1871 aa11.19□□□□□ -0.62
NUDCD3-204ENST00000464812 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 ST5P78524 1137 aa11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-204ENST00000464812 ITGA6P23229 1130 aa11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 RASSF7Q02833 373 aa11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 SF3B3Q15393 1217 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 SKAP1Q86WV1 359 aa11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
NUDCD3-204ENST00000464812 NPHP1O15259 732 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms