RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 GRAPQ13588 217 aa16.89■□□□□ 0.29
TSPAN1-202ENST00000464786 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
TSPAN1-202ENST00000464786 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
TSPAN1-202ENST00000464786 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
TSPAN1-202ENST00000464786 C7orf43Q8WVR3 580 aa16.89■□□□□ 0.29
TSPAN1-202ENST00000464786 CSF1RP07333 972 aa16.88■□□□□ 0.29
TSPAN1-202ENST00000464786 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.88■□□□□ 0.29
TSPAN1-202ENST00000464786 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
TSPAN1-202ENST00000464786 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 CCDC93Q567U6 631 aa16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 DZIP1LQ8IYY4 767 aaKnown RBP16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 ABCC4O15439 1325 aa16.87■□□□□ 0.29
TSPAN1-202ENST00000464786 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
TSPAN1-202ENST00000464786 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
TSPAN1-202ENST00000464786 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
TSPAN1-202ENST00000464786 ATP6V0A2Q9Y487 856 aa16.86■□□□□ 0.29
TSPAN1-202ENST00000464786 DLEC1Q9Y238 1755 aa16.86■□□□□ 0.29
TSPAN1-202ENST00000464786 GNAI3P08754 354 aa16.85■□□□□ 0.29
TSPAN1-202ENST00000464786 FOXO4P98177 505 aa16.85■□□□□ 0.29
TSPAN1-202ENST00000464786 CLUAP1Q96AJ1 413 aa16.85■□□□□ 0.29
TSPAN1-202ENST00000464786 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
TSPAN1-202ENST00000464786 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
TSPAN1-202ENST00000464786 ANKRD18AQ8IVF6 992 aa16.84■□□□□ 0.29
TSPAN1-202ENST00000464786 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
TSPAN1-202ENST00000464786 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
TSPAN1-202ENST00000464786 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 GREM2Q9H772 168 aa16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 TNRC6CQ9HCJ0 1690 aaKnown RBP16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
TSPAN1-202ENST00000464786 DDX60Q8IY21 1712 aaKnown RBP16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 LTBP3Q9NS15 1303 aa16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 ITGA6P23229 1130 aa16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 TMEM57Q8N5G2 664 aa16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
TSPAN1-202ENST00000464786 LMNB1P20700 586 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 FKBP4Q02790 459 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 EPHA10Q5JZY3 1008 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 MPNDQ8N594 471 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 PSMD1Q99460 953 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 MPHOSPH8Q99549 860 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 VPS33BQ9H267 617 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 BSDC1Q9NW68 430 aaPredicted RBP16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
TSPAN1-202ENST00000464786 NFKBIEO00221 500 aa16.8■□□□□ 0.28
TSPAN1-202ENST00000464786 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
TSPAN1-202ENST00000464786 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
TSPAN1-202ENST00000464786 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
TSPAN1-202ENST00000464786 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
TSPAN1-202ENST00000464786 LAMB2P55268 1798 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 FAM161AQ3B820 660 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 TAF7LQ5H9L4 462 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 ITPRIPQ8IWB1 547 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 MEIS3Q99687 375 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
TSPAN1-202ENST00000464786 GNAI2P04899 355 aa16.78■□□□□ 0.28
TSPAN1-202ENST00000464786 C9orf131Q5VYM1 1079 aa16.78■□□□□ 0.28
TSPAN1-202ENST00000464786 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
TSPAN1-202ENST00000464786 MYH3P11055 1940 aa16.78■□□□□ 0.28
TSPAN1-202ENST00000464786 CHD4Q14839 1912 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 PLIN1O60240 522 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 RLBP1P12271 317 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 RTFDC1Q9BY42 306 aaPredicted RBP16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 RNF181Q9P0P0 153 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 ANKIB1Q9P2G1 1089 aa16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-202ENST00000464786 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 RASSF7Q02833 373 aa16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 LDHAL6AQ6ZMR3 332 aa16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 UTRNP46939 3433 aa16.76■□□□□ 0.27
TSPAN1-202ENST00000464786 ZC3H4Q9UPT8 1303 aaKnown RBP16.75■□□□□ 0.27
TSPAN1-202ENST00000464786 EYA3Q99504 573 aa16.75■□□□□ 0.27
TSPAN1-202ENST00000464786 DDX19BQ9UMR2 479 aa16.75■□□□□ 0.27
TSPAN1-202ENST00000464786 MINPP1Q9UNW1 487 aa16.75■□□□□ 0.27
TSPAN1-202ENST00000464786 XDHP47989 1333 aa16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 IARSP41252 1262 aaKnown RBP16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 GPSM2P81274 684 aa16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 JDP2Q8WYK2 163 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms