RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 RRAGCQ9HB90 399 aa20.78■□□□□ 0.92
SSNA1-204ENST00000464553 ZNF277Q9NRM2 450 aaPredicted RBP20.78■□□□□ 0.92
SSNA1-204ENST00000464553 LINS1Q8NG48 757 aa20.77■□□□□ 0.92
SSNA1-204ENST00000464553 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
SSNA1-204ENST00000464553 CACNA1FO60840 1977 aa20.77■□□□□ 0.92
SSNA1-204ENST00000464553 NEURL1BA8MQ27 555 aa20.76■□□□□ 0.91
SSNA1-204ENST00000464553 H7C1W4 665 aa20.76■□□□□ 0.91
SSNA1-204ENST00000464553 FZD9O00144 591 aa20.76■□□□□ 0.91
SSNA1-204ENST00000464553 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
SSNA1-204ENST00000464553 DICER1Q9UPY3 1922 aaKnown RBP20.75■□□□□ 0.91
SSNA1-204ENST00000464553 RPS8P62241 208 aaKnown RBP20.75■□□□□ 0.91
SSNA1-204ENST00000464553 FSTL1Q12841 308 aa20.75■□□□□ 0.91
SSNA1-204ENST00000464553 MPNDQ8N594 471 aa20.75■□□□□ 0.91
SSNA1-204ENST00000464553 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
SSNA1-204ENST00000464553 DPP8Q6V1X1 898 aaPredicted RBP20.74■□□□□ 0.91
SSNA1-204ENST00000464553 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
SSNA1-204ENST00000464553 L3MBTL3Q96JM7 780 aaPredicted RBP20.74■□□□□ 0.91
SSNA1-204ENST00000464553 CACNA1SQ13698 1873 aa20.73■□□□□ 0.91
SSNA1-204ENST00000464553 CT47B1P0C2W7 299 aaPredicted RBP20.73■□□□□ 0.91
SSNA1-204ENST00000464553 GCKRQ14397 625 aa20.73■□□□□ 0.91
SSNA1-204ENST00000464553 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
SSNA1-204ENST00000464553 IQCA1LA6NCM1 817 aa20.72■□□□□ 0.91
SSNA1-204ENST00000464553 CWF19L2Q2TBE0 894 aaKnown RBP20.72■□□□□ 0.91
SSNA1-204ENST00000464553 LARGE2Q8N3Y3 721 aa20.72■□□□□ 0.91
SSNA1-204ENST00000464553 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
SSNA1-204ENST00000464553 EIF6P56537 245 aaKnown RBP20.71■□□□□ 0.91
SSNA1-204ENST00000464553 GPC2Q8N158 579 aa20.71■□□□□ 0.91
SSNA1-204ENST00000464553 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
SSNA1-204ENST00000464553 POTECB2RU33 542 aa20.7■□□□□ 0.9
SSNA1-204ENST00000464553 DDNO94850 711 aaPredicted RBP20.7■□□□□ 0.9
SSNA1-204ENST00000464553 HSPA6P17066 643 aa20.7■□□□□ 0.9
SSNA1-204ENST00000464553 CELF1Q92879 486 aaKnown RBP20.7■□□□□ 0.9
SSNA1-204ENST00000464553 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
SSNA1-204ENST00000464553 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
SSNA1-204ENST00000464553 CTSWP56202 376 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 ALDH1L2Q3SY69 923 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 BEND3Q5T5X7 828 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 SMC1BQ8NDV3 1235 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 TTLL11Q8NHH1 800 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 WDR90Q96KV7 1748 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 LAMB2P55268 1798 aa20.69■□□□□ 0.9
SSNA1-204ENST00000464553 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
SSNA1-204ENST00000464553 ALDH1L1O75891 902 aa20.68■□□□□ 0.9
SSNA1-204ENST00000464553 UBE3BQ7Z3V4 1068 aa20.68■□□□□ 0.9
SSNA1-204ENST00000464553 MIER1Q8N108 512 aa20.68■□□□□ 0.9
SSNA1-204ENST00000464553 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
SSNA1-204ENST00000464553 PODXL2Q9NZ53 605 aa20.68■□□□□ 0.9
SSNA1-204ENST00000464553 CASP7P55210 303 aa20.67■□□□□ 0.9
SSNA1-204ENST00000464553 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
SSNA1-204ENST00000464553 ZNRF3Q9ULT6 936 aa20.67■□□□□ 0.9
SSNA1-204ENST00000464553 NSFL1CQ9UNZ2 370 aaKnown RBP20.67■□□□□ 0.9
SSNA1-204ENST00000464553 PTPRCP08575 1304 aa20.67■□□□□ 0.9
SSNA1-204ENST00000464553 CSF1RP07333 972 aa20.66■□□□□ 0.9
SSNA1-204ENST00000464553 MRPL50Q8N5N7 158 aaKnown RBP20.66■□□□□ 0.9
SSNA1-204ENST00000464553 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
SSNA1-204ENST00000464553 EYA3Q99504 573 aa20.66■□□□□ 0.9
SSNA1-204ENST00000464553 WASHC4Q2M389 1173 aa20.65■□□□□ 0.9
SSNA1-204ENST00000464553 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
SSNA1-204ENST00000464553 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
SSNA1-204ENST00000464553 ZNF541Q9H0D2 1346 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 F6X3S4 739 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 APLP1P51693 650 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.89
SSNA1-204ENST00000464553 AOC3Q16853 763 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 PNMA8AQ86V59 439 aaPredicted RBP20.64■□□□□ 0.89
SSNA1-204ENST00000464553 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 BSDC1Q9NW68 430 aaPredicted RBP20.64■□□□□ 0.89
SSNA1-204ENST00000464553 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
SSNA1-204ENST00000464553 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
SSNA1-204ENST00000464553 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
SSNA1-204ENST00000464553 GRM8O00222 908 aa20.62■□□□□ 0.89
SSNA1-204ENST00000464553 GPSM2P81274 684 aa20.62■□□□□ 0.89
SSNA1-204ENST00000464553 TNIP1Q15025 636 aa20.62■□□□□ 0.89
SSNA1-204ENST00000464553 LRRC37AA6NMS7 1700 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 C6orf229H3BNL8 230 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 TBC1D16Q8TBP0 767 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 ZC3H12CQ9C0D7 883 aaKnown RBP20.61■□□□□ 0.89
SSNA1-204ENST00000464553 GREM2Q9H772 168 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 C9orf78Q9NZ63 289 aaPredicted RBP20.61■□□□□ 0.89
SSNA1-204ENST00000464553 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 POLLQ9UGP5 575 aa20.61■□□□□ 0.89
SSNA1-204ENST00000464553 XDHP47989 1333 aa20.6■□□□□ 0.89
SSNA1-204ENST00000464553 IGHMBP2P38935 993 aaKnown RBP20.6■□□□□ 0.89
SSNA1-204ENST00000464553 CXCL9Q07325 125 aa20.6■□□□□ 0.89
SSNA1-204ENST00000464553 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
SSNA1-204ENST00000464553 GGA1Q9UJY5 639 aa20.6■□□□□ 0.89
SSNA1-204ENST00000464553 SCN4AP35499 1836 aa20.6■□□□□ 0.89
SSNA1-204ENST00000464553 ATP2B4P23634 1241 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-204ENST00000464553 EPHX2P34913 555 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 CIAPIN1Q6FI81 312 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 CHADLQ6NUI6 762 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 SLC4A10Q6U841 1118 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 LDHDQ86WU2 507 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 CCDC85AQ96PX6 553 aaPredicted RBP20.59■□□□□ 0.89
SSNA1-204ENST00000464553 GJA3Q9Y6H8 435 aa20.59■□□□□ 0.89
SSNA1-204ENST00000464553 UTYO14607 1347 aa20.58■□□□□ 0.89
SSNA1-204ENST00000464553 ITGA6P23229 1130 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms