RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 NUP188Q5SRE5 1749 aa23.79■■□□□ 1.4
POLR2J3-203ENST00000464525 ITPK1Q13572 414 aa23.78■■□□□ 1.4
POLR2J3-203ENST00000464525 FSD1Q9BTV5 496 aa23.78■■□□□ 1.4
POLR2J3-203ENST00000464525 MCM2P49736 904 aa23.78■■□□□ 1.4
POLR2J3-203ENST00000464525 DBNDD2Q9BQY9 259 aa23.78■■□□□ 1.4
POLR2J3-203ENST00000464525 ATRNO75882 1429 aa23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 COL15A1P39059 1388 aa23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 IL27Q8NEV9 243 aa23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 ZNF594Q96JF6 807 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 A0A0D9SFI3 127 aa23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 KIF6Q6ZMV9 814 aa23.77■■□□□ 1.4
POLR2J3-203ENST00000464525 CHGBP05060 677 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 CUL4AQ13619 759 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 ADCK5Q3MIX3 580 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 MCTP1Q6DN14 999 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 CLEC17AQ6ZS10 378 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 CCDC191Q8NCU4 936 aa23.76■■□□□ 1.39
POLR2J3-203ENST00000464525 CRKLP46109 303 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-203ENST00000464525 HLFQ16534 295 aa23.75■■□□□ 1.39
POLR2J3-203ENST00000464525 ATG9AQ7Z3C6 839 aa23.75■■□□□ 1.39
POLR2J3-203ENST00000464525 TBC1D2BQ9UPU7 963 aa23.75■■□□□ 1.39
POLR2J3-203ENST00000464525 CASTP20810 708 aaKnown RBP23.74■■□□□ 1.39
POLR2J3-203ENST00000464525 INTS5Q6P9B9 1019 aaKnown RBP23.74■■□□□ 1.39
POLR2J3-203ENST00000464525 CCDC171Q6TFL3 1326 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 LRRC24Q50LG9 513 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 SMARCC1Q92922 1105 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 TTC14Q96N46 770 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 CCDC85AQ96PX6 553 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 MAP3K15Q6ZN16 1313 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 AK2P54819 239 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 TCIRG1Q13488 830 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 COL9A3Q14050 684 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 DNAJC2Q99543 621 aaKnown RBP23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 CCDC87Q9NVE4 849 aa23.73■■□□□ 1.39
POLR2J3-203ENST00000464525 ATP5JP18859 108 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 TIMM10P62072 90 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 NEUROD6Q96NK8 337 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 ISCA1Q9BUE6 129 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 DTNBO60941 627 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 GPTP24298 496 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 FAM89AQ96GI7 184 aa23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 PUS3Q9BZE2 481 aaKnown RBP23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 RBM8AQ9Y5S9 174 aaKnown RBP23.72■■□□□ 1.39
POLR2J3-203ENST00000464525 NECTIN1Q15223 517 aa23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 SYNE4Q8N205 404 aa23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 JAKMIP1Q96N16 626 aaKnown RBP23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 GOLGA6L22H0YM25 854 aa23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 ONECUT3O60422 494 aaPredicted RBP23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 RUFY3Q7L099 469 aa23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 DZIP3Q86Y13 1208 aaKnown RBP23.71■■□□□ 1.39
POLR2J3-203ENST00000464525 KCNJ4P48050 445 aa23.7■■□□□ 1.38
POLR2J3-203ENST00000464525 GOLGA6L3A6NEY3 463 aa23.7■■□□□ 1.38
POLR2J3-203ENST00000464525 GIGYF2Q6Y7W6 1299 aaKnown RBP23.7■■□□□ 1.38
POLR2J3-203ENST00000464525 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
POLR2J3-203ENST00000464525 MYH14Q7Z406 1995 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 HIP1O00291 1037 aa23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 TAF6LQ9Y6J9 622 aa23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 EP400Q96L91 3159 aa23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 FSD2A1L4K1 749 aa23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 DDX46Q7L014 1031 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 INTS4Q96HW7 963 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-203ENST00000464525 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
POLR2J3-203ENST00000464525 CREB3L3Q68CJ9 461 aa23.68■■□□□ 1.38
POLR2J3-203ENST00000464525 SKOR2Q2VWA4 1001 aaPredicted RBP23.68■■□□□ 1.38
POLR2J3-203ENST00000464525 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
POLR2J3-203ENST00000464525 LINC00116Q8NCU8 138 aa23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 SEC62Q99442 399 aaKnown RBP23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 BTAF1O14981 1849 aa23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 LARGE1O95461 756 aa23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 XRCC6P12956 609 aaKnown RBP eCLIP23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 SLFNL1Q499Z3 407 aa23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 LMBRD1Q9NUN5 540 aa23.67■■□□□ 1.38
POLR2J3-203ENST00000464525 EYA2O00167 538 aa23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 SMIM5Q71RC9 77 aa23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 PRPF40AO75400 957 aaKnown RBP23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 FOXD4L6Q3SYB3 417 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 FOXD4L3Q6VB84 417 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 CCDC129Q6ZRS4 1044 aa23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 KCNB2Q92953 911 aa23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 MED23Q9ULK4 1368 aa23.66■■□□□ 1.38
POLR2J3-203ENST00000464525 SLC27A2O14975 620 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 BRD1O95696 1058 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 IL15P40933 162 aaPredicted RBP23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 HAUS7Q99871 368 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 SNRKQ9NRH2 765 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 LIMCH1Q9UPQ0 1083 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 ZSWIM6Q9HCJ5 1215 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 PDRG1Q9NUG6 133 aa23.65■■□□□ 1.38
POLR2J3-203ENST00000464525 ZKSCAN1P17029 563 aaPredicted RBP23.64■■□□□ 1.37
POLR2J3-203ENST00000464525 L1TD1Q5T7N2 865 aaKnown RBP23.64■■□□□ 1.37
POLR2J3-203ENST00000464525 PANK2Q9BZ23 570 aa23.64■■□□□ 1.37
POLR2J3-203ENST00000464525 PTMSP20962 102 aa23.64■■□□□ 1.37
POLR2J3-203ENST00000464525 TCEANC2Q96MN5 208 aa23.64■■□□□ 1.37
POLR2J3-203ENST00000464525 TAF5LO75529 589 aa23.63■■□□□ 1.37
POLR2J3-203ENST00000464525 NCLP19338 710 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms