RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
RN7SL541P-201ENST00000464317 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
RN7SL541P-201ENST00000464317 CCDC85CA6NKD9 419 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 SAPCD2Q86UD0 394 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 ZNF408Q9H9D4 720 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 BABAM1Q9NWV8 329 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
RN7SL541P-201ENST00000464317 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 GRAPQ13588 217 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
RN7SL541P-201ENST00000464317 CA12O43570 354 aa11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 HHIPL1Q96JK4 782 aa11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 CNOT7Q9UIV1 285 aaKnown RBP11.88□□□□□ -0.51
RN7SL541P-201ENST00000464317 H7C1D1 291 aa11.87□□□□□ -0.51
RN7SL541P-201ENST00000464317 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
RN7SL541P-201ENST00000464317 HIRAP54198 1017 aaPredicted RBP11.87□□□□□ -0.51
RN7SL541P-201ENST00000464317 TRPM4Q8TD43 1214 aa11.87□□□□□ -0.51
RN7SL541P-201ENST00000464317 ZNF428Q96B54 188 aa11.87□□□□□ -0.51
RN7SL541P-201ENST00000464317 YDJCA8MPS7 323 aa11.86□□□□□ -0.51
RN7SL541P-201ENST00000464317 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
RN7SL541P-201ENST00000464317 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
RN7SL541P-201ENST00000464317 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
RN7SL541P-201ENST00000464317 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
RN7SL541P-201ENST00000464317 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 MLLT1Q03111 559 aaPredicted RBP11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
RN7SL541P-201ENST00000464317 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 PSMD14O00487 310 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 HUNKP57058 714 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 NOGQ13253 232 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 RALBP1Q15311 655 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 DPF2Q92785 391 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 FAM89AQ96GI7 184 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 MCOLN1Q9GZU1 580 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 DBNDD1Q9H9R9 158 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 LAMB2P55268 1798 aa11.84□□□□□ -0.51
RN7SL541P-201ENST00000464317 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 CHL1O00533 1208 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 CCDC146Q8IYE0 955 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 CELF1Q92879 486 aaKnown RBP11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 EYA3Q99504 573 aa11.83□□□□□ -0.52
RN7SL541P-201ENST00000464317 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 RGS19P49795 217 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 GPSM2P81274 684 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DGKZQ13574 1117 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 C2orf69Q8N8R5 385 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DBF4Q9UBU7 674 aaPredicted RBP11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 DUOX1Q9NRD9 1551 aa11.82□□□□□ -0.52
RN7SL541P-201ENST00000464317 G3V3G9 751 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 ECE2O60344 883 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 HOXB7P09629 217 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 RGMBQ6NW40 437 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 ZIC5Q96T25 663 aa11.81□□□□□ -0.52
RN7SL541P-201ENST00000464317 TAF1P21675 1872 aa11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 ADM5C9JUS6 153 aa11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 EGFRP00533 1210 aa11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
RN7SL541P-201ENST00000464317 KIF4BQ2VIQ3 1234 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms