RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 SNED1Q8TER0 1413 aa9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 BBOX1O75936 387 aa9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 SF3B3Q15393 1217 aaKnown RBP9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 DDX46Q7L014 1031 aaKnown RBP9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 FAM89AQ96GI7 184 aa9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 TMX4Q9H1E5 349 aaPredicted RBP9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
THUMPD3-208ENST00000464045 FER1L6Q2WGJ9 1857 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 TCERG1O14776 1098 aaKnown RBP9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 IGKV5-2P06315 115 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 SLFN5Q08AF3 891 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 FSTL1Q12841 308 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 GRAPQ13588 217 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 G2E3Q7L622 706 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 SMC1BQ8NDV3 1235 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 ABCC4O15439 1325 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 CDHR2Q9BYE9 1310 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
THUMPD3-208ENST00000464045 GLTPD2A6NH11 291 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 SP8Q8IXZ3 490 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 MIER1Q8N108 512 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 LINS1Q8NG48 757 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 TIAM2Q8IVF5 1701 aa9.48□□□□□ -0.89
THUMPD3-208ENST00000464045 CACNA1FO60840 1977 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 PDE8AO60658 829 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 VEGFAP15692 232 aaPredicted RBP9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 GCKRQ14397 625 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 CCDC152Q4G0S7 254 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 OLFM4Q6UX06 510 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 SUPT20HQ8NEM7 779 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 LAMB2P55268 1798 aa9.47□□□□□ -0.89
THUMPD3-208ENST00000464045 DDX60Q8IY21 1712 aaKnown RBP9.46□□□□□ -0.89
THUMPD3-208ENST00000464045 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 ALDH1L2Q3SY69 923 aa9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 TNS4Q8IZW8 715 aa9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 RTFDC1Q9BY42 306 aaPredicted RBP9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 PTPRCP08575 1304 aa9.46□□□□□ -0.9
THUMPD3-208ENST00000464045 POTECB2RU33 542 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 H7C1W4 665 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 FZD9O00144 591 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 POTEIP0CG38 1075 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 POTEJP0CG39 1038 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 CTSWP56202 376 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 DPP8Q6V1X1 898 aaPredicted RBP9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 JDP2Q8WYK2 163 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 MKRN1Q9UHC7 482 aaKnown RBP9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 RTL9Q8NET4 1388 aa9.45□□□□□ -0.9
THUMPD3-208ENST00000464045 ALDH1L1O75891 902 aa9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 DDNO94850 711 aaPredicted RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 HSPA1AP0DMV8 641 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 HSPA1BP0DMV9 641 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 RPS8P62241 208 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 MPNDQ8N594 471 aa9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 JMYQ8N9B5 988 aa9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 CELF1Q92879 486 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-208ENST00000464045 LRRC37AA6NMS7 1700 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 F6X3S4 739 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 CASP7P55210 303 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 UBE3BQ7Z3V4 1068 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 LARGE2Q8N3Y3 721 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 TTLL11Q8NHH1 800 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 SSH1Q8WYL5 1049 aa9.43□□□□□ -0.9
THUMPD3-208ENST00000464045 IQCA1LA6NCM1 817 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 GRM8O00222 908 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 PPIP5K2O43314 1243 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 ANKRD18AQ8IVF6 992 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 GPC2Q8N158 579 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 JARID2Q92833 1246 aaPredicted RBP9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 SEC31BQ9NQW1 1179 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
THUMPD3-208ENST00000464045 ZNF541Q9H0D2 1346 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 CSF1RP07333 972 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 AOC3Q16853 763 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms