RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TARSP26639 723 aaKnown RBP8.72□□□□□ -1.01
ITGB1-208ENST00000464001 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-208ENST00000464001 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
ITGB1-208ENST00000464001 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
ITGB1-208ENST00000464001 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 SASH3O75995 380 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 RARAP10276 462 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
ITGB1-208ENST00000464001 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 DHX32Q7L7V1 743 aaKnown RBP8.71□□□□□ -1.02
ITGB1-208ENST00000464001 FAM35AQ86V20 835 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 ZFATQ9P243 1243 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
ITGB1-208ENST00000464001 EGFRP00533 1210 aa8.7□□□□□ -1.02
ITGB1-208ENST00000464001 TMEM164Q5U3C3 297 aa8.7□□□□□ -1.02
ITGB1-208ENST00000464001 CMTR1Q8N1G2 835 aaKnown RBP8.7□□□□□ -1.02
ITGB1-208ENST00000464001 TRPM4Q8TD43 1214 aa8.7□□□□□ -1.02
ITGB1-208ENST00000464001 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-208ENST00000464001 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
ITGB1-208ENST00000464001 XYLBO75191 536 aa8.69□□□□□ -1.02
ITGB1-208ENST00000464001 CPB1P15086 417 aa8.69□□□□□ -1.02
ITGB1-208ENST00000464001 AFF1P51825 1210 aaKnown RBP8.69□□□□□ -1.02
ITGB1-208ENST00000464001 RAC1P63000 192 aa8.69□□□□□ -1.02
ITGB1-208ENST00000464001 RGL4Q8IZJ4 473 aa8.69□□□□□ -1.02
ITGB1-208ENST00000464001 NAGPAQ9UK23 515 aa8.69□□□□□ -1.02
ITGB1-208ENST00000464001 A0A0A0MRY4 1105 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 GPLD1P80108 840 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 DOC2BQ14184 412 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 GRIK4Q16099 956 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
ITGB1-208ENST00000464001 MKNK1Q9BUB5 465 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 SAP130Q9H0E3 1048 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 USP20Q9Y2K6 914 aa8.68□□□□□ -1.02
ITGB1-208ENST00000464001 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
ITGB1-208ENST00000464001 C9orf172C9J069 976 aa8.67□□□□□ -1.02
ITGB1-208ENST00000464001 NRLP54845 237 aa8.67□□□□□ -1.02
ITGB1-208ENST00000464001 ELMSAN1Q6PJG2 1045 aa8.67□□□□□ -1.02
ITGB1-208ENST00000464001 FAM13BQ9NYF5 915 aa8.67□□□□□ -1.02
ITGB1-208ENST00000464001 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
ITGB1-208ENST00000464001 ELNP15502 786 aa8.66□□□□□ -1.02
ITGB1-208ENST00000464001 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-208ENST00000464001 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
ITGB1-208ENST00000464001 DMRTC2Q8IXT2 367 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-208ENST00000464001 PSAPP07602 524 aa8.65□□□□□ -1.02
ITGB1-208ENST00000464001 NAA30Q147X3 362 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-208ENST00000464001 PERM1Q5SV97 790 aa8.65□□□□□ -1.02
ITGB1-208ENST00000464001 TTC9Q92623 222 aa8.65□□□□□ -1.02
ITGB1-208ENST00000464001 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.02
ITGB1-208ENST00000464001 KCNMB2Q9Y691 235 aa8.65□□□□□ -1.02
ITGB1-208ENST00000464001 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
ITGB1-208ENST00000464001 PLAURQ03405 335 aa8.64□□□□□ -1.03
ITGB1-208ENST00000464001 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
ITGB1-208ENST00000464001 PIK3R5Q8WYR1 880 aa8.64□□□□□ -1.03
ITGB1-208ENST00000464001 NRG1Q02297 640 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-208ENST00000464001 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
ITGB1-208ENST00000464001 HFE2Q6ZVN8 426 aa8.63□□□□□ -1.03
ITGB1-208ENST00000464001 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
ITGB1-208ENST00000464001 DTWD1Q8N5C7 304 aa8.63□□□□□ -1.03
ITGB1-208ENST00000464001 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 TNFRSF10BO14763 440 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 MMP20O60882 483 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 SELPP16109 830 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
ITGB1-208ENST00000464001 ATP2B4P23634 1241 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 SIK1P57059 783 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 NLRP13Q86W25 1043 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 WFDC8Q8IUA0 241 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-208ENST00000464001 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-208ENST00000464001 SMG9Q9H0W8 520 aaKnown RBP8.62□□□□□ -1.03
ITGB1-208ENST00000464001 RBSNQ9H1K0 784 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 SEMA6BQ9H3T3 888 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 STIM2Q9P246 746 aa8.62□□□□□ -1.03
ITGB1-208ENST00000464001 GHRHP01286 108 aa8.61□□□□□ -1.03
ITGB1-208ENST00000464001 SOX18P35713 384 aa8.61□□□□□ -1.03
ITGB1-208ENST00000464001 GRIK5Q16478 980 aa8.61□□□□□ -1.03
ITGB1-208ENST00000464001 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
ITGB1-208ENST00000464001 TPSG1Q9NRR2 321 aa8.61□□□□□ -1.03
ITGB1-208ENST00000464001 FNDC3AQ9Y2H6 1198 aaKnown RBP8.61□□□□□ -1.03
ITGB1-208ENST00000464001 UBAP1LF5GYI3 381 aa8.6□□□□□ -1.03
ITGB1-208ENST00000464001 ZAP70P43403 619 aa8.6□□□□□ -1.03
ITGB1-208ENST00000464001 ADGRE1Q14246 886 aa8.6□□□□□ -1.03
ITGB1-208ENST00000464001 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
ITGB1-208ENST00000464001 J3QW42 95 aa8.59□□□□□ -1.03
ITGB1-208ENST00000464001 HOXD8P13378 290 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-208ENST00000464001 MBTPS1Q14703 1052 aa8.59□□□□□ -1.03
ITGB1-208ENST00000464001 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
ITGB1-208ENST00000464001 PLD4Q96BZ4 506 aa8.59□□□□□ -1.03
ITGB1-208ENST00000464001 USP21Q9UK80 565 aa8.59□□□□□ -1.03
ITGB1-208ENST00000464001 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-208ENST00000464001 RSPO4Q2I0M5 234 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-208ENST00000464001 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
ITGB1-208ENST00000464001 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
ITGB1-208ENST00000464001 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
ITGB1-208ENST00000464001 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
ITGB1-208ENST00000464001 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
ITGB1-208ENST00000464001 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
ITGB1-208ENST00000464001 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
ITGB1-208ENST00000464001 GPR152Q8TDT2 470 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms