RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
USP9X-204ENST00000463829 CHSY3Q70JA7 882 aa7.55□□□□□ -1.2
USP9X-204ENST00000463829 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
USP9X-204ENST00000463829 MARK1Q9P0L2 795 aa7.55□□□□□ -1.2
USP9X-204ENST00000463829 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 FURINP09958 794 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
USP9X-204ENST00000463829 ALAS2P22557 587 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 DGKGP49619 791 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 IDH3AP50213 366 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
USP9X-204ENST00000463829 OPLAHO14841 1288 aa7.53□□□□□ -1.2
USP9X-204ENST00000463829 INPP5BP32019 993 aa7.53□□□□□ -1.2
USP9X-204ENST00000463829 ARSDP51689 593 aa7.53□□□□□ -1.2
USP9X-204ENST00000463829 ATCAYQ86WG3 371 aa7.53□□□□□ -1.2
USP9X-204ENST00000463829 BRPF3Q9ULD4 1205 aa7.53□□□□□ -1.2
USP9X-204ENST00000463829 NDUFB5O43674 189 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 EPB42P16452 691 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 MZF1P28698 734 aaPredicted RBP7.52□□□□□ -1.21
USP9X-204ENST00000463829 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
USP9X-204ENST00000463829 TYRO3Q06418 890 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 ZNF468Q5VIY5 522 aaPredicted RBP7.52□□□□□ -1.21
USP9X-204ENST00000463829 PIK3R5Q8WYR1 880 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
USP9X-204ENST00000463829 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
USP9X-204ENST00000463829 SPDYE3A6NKU9 549 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 FZD6O60353 706 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 PCSK2P16519 638 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 DNM1Q05193 864 aaKnown RBP7.51□□□□□ -1.21
USP9X-204ENST00000463829 CD163Q86VB7 1156 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 GPR152Q8TDT2 470 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 CITED4Q96RK1 184 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 CCDC87Q9NVE4 849 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 HCN2Q9UL51 889 aa7.51□□□□□ -1.21
USP9X-204ENST00000463829 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
USP9X-204ENST00000463829 MAPK1P28482 360 aa7.5□□□□□ -1.21
USP9X-204ENST00000463829 USP5P45974 858 aa7.5□□□□□ -1.21
USP9X-204ENST00000463829 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
USP9X-204ENST00000463829 RGL4Q8IZJ4 473 aa7.5□□□□□ -1.21
USP9X-204ENST00000463829 TTC16Q8NEE8 873 aa7.5□□□□□ -1.21
USP9X-204ENST00000463829 EDEM1Q92611 657 aa7.5□□□□□ -1.21
USP9X-204ENST00000463829 RTCBQ9Y3I0 505 aaKnown RBP7.5□□□□□ -1.21
USP9X-204ENST00000463829 ELOA3CA0A087WX78 387 aaPredicted RBP7.49□□□□□ -1.21
USP9X-204ENST00000463829 ELOA3DA6NLF2 546 aaPredicted RBP7.49□□□□□ -1.21
USP9X-204ENST00000463829 EFSO43281 561 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 PDGFAP04085 211 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 KCNQ4P56696 695 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 ELOA3BQ3SY89 546 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 XP32Q5T750 250 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 CMTR1Q8N1G2 835 aaKnown RBP7.49□□□□□ -1.21
USP9X-204ENST00000463829 ELOA3Q8NG57 546 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 NUDT16Q96DE0 195 aaKnown RBP7.49□□□□□ -1.21
USP9X-204ENST00000463829 PLVAPQ9BX97 442 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 C11orf16Q9NQ32 467 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 POLIQ9UNA4 740 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
USP9X-204ENST00000463829 FNDC3AQ9Y2H6 1198 aaKnown RBP7.49□□□□□ -1.21
USP9X-204ENST00000463829 SFSWAPQ12872 951 aaKnown RBP7.48□□□□□ -1.21
USP9X-204ENST00000463829 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
USP9X-204ENST00000463829 PRRT3Q5FWE3 981 aa7.48□□□□□ -1.21
USP9X-204ENST00000463829 SYT9Q86SS6 491 aa7.48□□□□□ -1.21
USP9X-204ENST00000463829 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
USP9X-204ENST00000463829 RBCK1Q9BYM8 510 aa7.48□□□□□ -1.21
USP9X-204ENST00000463829 SPATA31C1P0DKV0 1188 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 CHRNA4P43681 627 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 GATA4P43694 442 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 TMC1Q8TDI8 760 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
USP9X-204ENST00000463829 APBA3O96018 575 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 ERCC3P19447 782 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 EHHADHQ08426 723 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 C8orf34Q49A92 452 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 GJD3Q8N144 294 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
USP9X-204ENST00000463829 UBAP1LF5GYI3 381 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 SIN3BO75182 1162 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 XYLBO75191 536 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 EGFRP00533 1210 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 GRNP28799 593 aaKnown RBP7.45□□□□□ -1.22
USP9X-204ENST00000463829 TRIM11Q96F44 468 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 DMRTB1Q96MA1 342 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 GGNBP2Q9H3C7 697 aa7.45□□□□□ -1.22
USP9X-204ENST00000463829 CCINQ13939 588 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 DOC2BQ14184 412 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 DNAJC14Q6Y2X3 702 aaPredicted RBP7.44□□□□□ -1.22
USP9X-204ENST00000463829 TMC7Q7Z402 723 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 FAM129BQ96TA1 746 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 GSX2Q9BZM3 304 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 SEMA6BQ9H3T3 888 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 EFCC1Q9HA90 598 aa7.44□□□□□ -1.22
USP9X-204ENST00000463829 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
USP9X-204ENST00000463829 ADARB2-AS1A8MUL3 147 aa7.43□□□□□ -1.22
USP9X-204ENST00000463829 SPEM2Q0P670 501 aa7.43□□□□□ -1.22
USP9X-204ENST00000463829 TRIP4Q15650 581 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms