RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CCDC172P0C7W6 258 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 RAD51AP2Q09MP3 1159 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 SART3Q15020 963 aaKnown RBP4.39□□□□□ -1.71
COL8A1-205ENST00000463753 HS1BP3Q53T59 392 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 C10orf67Q8IYJ2 551 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 RNF214Q8ND24 703 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 PRIMPOLQ96LW4 560 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 C8orf37Q96NL8 207 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 SYT17Q9BSW7 474 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 FAM217BQ9NTX9 383 aaPredicted RBP4.39□□□□□ -1.71
COL8A1-205ENST00000463753 CCDC39Q9UFE4 941 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 SPATA31A3Q5VYP0 1347 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 SPATA31E1Q6ZUB1 1445 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 MEGF6O75095 1541 aa4.39□□□□□ -1.71
COL8A1-205ENST00000463753 CD46P15529 392 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 TERF2Q15554 542 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 SKOR2Q2VWA4 1001 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 HSP90AB3PQ58FF7 597 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 COL13A1Q5TAT6 717 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 THSD4Q6ZMP0 1018 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 NCAPGQ9BPX3 1015 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 LTBP1Q14766 1721 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 SCN4AP35499 1836 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 CPDO75976 1380 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 CA12O43570 354 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 CLSTN1O94985 981 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 TDO2P48775 406 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 BRPF1P55201 1214 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 R3HDM1Q15032 1099 aaKnown RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 CAVIN1Q6NZI2 390 aaKnown RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 HSCBQ8IWL3 235 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 SLF2Q8IX21 1173 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 PARP9Q8IXQ6 854 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 KRI1Q8N9T8 703 aaKnown RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 FEZ1Q99689 392 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 RBSNQ9H1K0 784 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 RASSF4Q9H2L5 321 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 GTF2F1P35269 517 aaKnown RBP eCLIP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 HNRNPH2P55795 449 aaKnown RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 SATB1Q01826 763 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 CHAF1AQ13111 956 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 MMRN1Q13201 1228 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 ANKK1Q8NFD2 765 aa4.38□□□□□ -1.71
COL8A1-205ENST00000463753 REPIN1Q9BWE0 567 aaKnown RBP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.38□□□□□ -1.71
COL8A1-205ENST00000463753 SSC5DA1L4H1 1573 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 E9PCH4 1651 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 GOLGA6L22H0YM25 854 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 MCM5P33992 734 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 NOP2P46087 812 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 MFAP1P55081 439 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 TUSC1Q2TAM9 212 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 SWT1Q5T5J6 900 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 ICE2Q659A1 982 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 CALR3Q96L12 384 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 CCDC7Q96M83 1385 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 HSP90AB1P08238 724 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 TBC1D32Q96NH3 1257 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 ST7Q9NRC1 585 aa4.37□□□□□ -1.71
COL8A1-205ENST00000463753 SEPT9Q9UHD8 586 aaPredicted RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 TSR3Q9UJK0 312 aaKnown RBP4.37□□□□□ -1.71
COL8A1-205ENST00000463753 GJA5P36382 358 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 MAP2K1Q02750 393 aaPredicted RBP4.36□□□□□ -1.71
COL8A1-205ENST00000463753 NOLC1Q14978 699 aaKnown RBP eCLIP4.36□□□□□ -1.71
COL8A1-205ENST00000463753 SAMD7Q7Z3H4 446 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 SULF1Q8IWU6 871 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 SGSM3Q96HU1 749 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 SLC26A8Q96RN1 970 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 SMAPO00193 183 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 RGS20O76081 388 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 WNT2BQ93097 391 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 LRCH3Q96II8 777 aa4.36□□□□□ -1.71
COL8A1-205ENST00000463753 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.36□□□□□ -1.71
COL8A1-205ENST00000463753 GOLGA6L6A8MZA4 724 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 SLC10A3P09131 477 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 BIRC2Q13490 618 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 NBPF20Q3BBV1 942 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 ZSCAN23Q3MJ62 389 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 KRT222Q8N1A0 295 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 NOL10Q9BSC4 688 aaKnown RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 TTC12Q9H892 705 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 GPBP1L1Q9HC44 474 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 SUFUQ9UMX1 484 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 ARID4AP29374 1257 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 GCGRP47871 477 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 PPP2R5AQ15172 486 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 GIGYF2Q6Y7W6 1299 aaKnown RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 DEFB132Q7Z7B7 95 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 SMC1BQ8NDV3 1235 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 PIK3R5Q8WYR1 880 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 RNF166Q96A37 237 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 PDLIM2Q96JY6 352 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 PRR14Q9BWN1 585 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 KIAA0232Q92628 1395 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 KIF7Q2M1P5 1343 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 TIAM2Q8IVF5 1701 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 A0A1W2PPC1 479 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 GUCY2CP25092 1073 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 NAA30Q147X3 362 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms