RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 H7C1D1 291 aa19.1■□□□□ 0.65
SMC1A-204ENST00000463684 RAD17O75943 681 aa19.1■□□□□ 0.65
SMC1A-204ENST00000463684 KIAA2012Q0VF49 1180 aa19.1■□□□□ 0.65
SMC1A-204ENST00000463684 LAMB4A4D0S4 1761 aa19.1■□□□□ 0.65
SMC1A-204ENST00000463684 TRPM7Q96QT4 1865 aa19.09■□□□□ 0.65
SMC1A-204ENST00000463684 HIRAP54198 1017 aaPredicted RBP19.09■□□□□ 0.65
SMC1A-204ENST00000463684 NOGQ13253 232 aa19.09■□□□□ 0.65
SMC1A-204ENST00000463684 CNOT7Q9UIV1 285 aaKnown RBP19.09■□□□□ 0.65
SMC1A-204ENST00000463684 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
SMC1A-204ENST00000463684 DDX46Q7L014 1031 aaKnown RBP19.08■□□□□ 0.64
SMC1A-204ENST00000463684 THUMPD2Q9BTF0 503 aaKnown RBP19.08■□□□□ 0.64
SMC1A-204ENST00000463684 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.64
SMC1A-204ENST00000463684 EIF2S2P20042 333 aaKnown RBP19.07■□□□□ 0.64
SMC1A-204ENST00000463684 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
SMC1A-204ENST00000463684 PCDH10Q9P2E7 1040 aa19.07■□□□□ 0.64
SMC1A-204ENST00000463684 HCLS1P14317 486 aaPredicted RBP19.06■□□□□ 0.64
SMC1A-204ENST00000463684 HUNKP57058 714 aa19.06■□□□□ 0.64
SMC1A-204ENST00000463684 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
SMC1A-204ENST00000463684 TRPM4Q8TD43 1214 aa19.06■□□□□ 0.64
SMC1A-204ENST00000463684 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
SMC1A-204ENST00000463684 GRAPQ13588 217 aa19.05■□□□□ 0.64
SMC1A-204ENST00000463684 MICALL2Q8IY33 904 aa19.05■□□□□ 0.64
SMC1A-204ENST00000463684 GRAPLQ8TC17 118 aaPredicted RBP19.05■□□□□ 0.64
SMC1A-204ENST00000463684 PLEKHF1Q96S99 279 aa19.05■□□□□ 0.64
SMC1A-204ENST00000463684 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
SMC1A-204ENST00000463684 MAPK8IP3Q9UPT6 1336 aa19.04■□□□□ 0.64
SMC1A-204ENST00000463684 PDIA6Q15084 440 aa19.04■□□□□ 0.64
SMC1A-204ENST00000463684 TMC4Q7Z404 712 aa19.04■□□□□ 0.64
SMC1A-204ENST00000463684 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
SMC1A-204ENST00000463684 YDJCA8MPS7 323 aa19.03■□□□□ 0.64
SMC1A-204ENST00000463684 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
SMC1A-204ENST00000463684 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
SMC1A-204ENST00000463684 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
SMC1A-204ENST00000463684 DPF2Q92785 391 aa19.03■□□□□ 0.64
SMC1A-204ENST00000463684 ZIC5Q96T25 663 aa19.03■□□□□ 0.64
SMC1A-204ENST00000463684 SHTN1A0MZ66 631 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 ANXA1P04083 346 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 WASHC4Q2M389 1173 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 RGMBQ6NW40 437 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 COPS6Q7L5N1 327 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 C2orf69Q8N8R5 385 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 CCDC102AQ96A19 550 aa19.02■□□□□ 0.64
SMC1A-204ENST00000463684 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
SMC1A-204ENST00000463684 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
SMC1A-204ENST00000463684 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
SMC1A-204ENST00000463684 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
SMC1A-204ENST00000463684 SAMD7Q7Z3H4 446 aa19.01■□□□□ 0.63
SMC1A-204ENST00000463684 KRT26Q7Z3Y9 468 aa19.01■□□□□ 0.63
SMC1A-204ENST00000463684 DCPSQ96C86 337 aaKnown RBP19.01■□□□□ 0.63
SMC1A-204ENST00000463684 PSMD14O00487 310 aa19■□□□□ 0.63
SMC1A-204ENST00000463684 TBC1D10BQ4KMP7 808 aaPredicted RBP19■□□□□ 0.63
SMC1A-204ENST00000463684 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
SMC1A-204ENST00000463684 GBA2Q9HCG7 927 aaPredicted RBP19■□□□□ 0.63
SMC1A-204ENST00000463684 SAGE1Q9NXZ1 904 aa19■□□□□ 0.63
SMC1A-204ENST00000463684 ZNF157P51786 506 aaPredicted RBP18.99■□□□□ 0.63
SMC1A-204ENST00000463684 RBM26Q5T8P6 1007 aaKnown RBP18.99■□□□□ 0.63
SMC1A-204ENST00000463684 DLK2Q6UY11 383 aa18.99■□□□□ 0.63
SMC1A-204ENST00000463684 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
SMC1A-204ENST00000463684 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
SMC1A-204ENST00000463684 NSFL1CQ9UNZ2 370 aaKnown RBP18.99■□□□□ 0.63
SMC1A-204ENST00000463684 FAM155AB1AL88 458 aaPredicted RBP18.98■□□□□ 0.63
SMC1A-204ENST00000463684 C6orf229H3BNL8 230 aa18.98■□□□□ 0.63
SMC1A-204ENST00000463684 RIMBP2O15034 1052 aa18.98■□□□□ 0.63
SMC1A-204ENST00000463684 RPS12P25398 132 aaKnown RBP18.98■□□□□ 0.63
SMC1A-204ENST00000463684 KIF23Q02241 960 aaPredicted RBP18.98■□□□□ 0.63
SMC1A-204ENST00000463684 DBNDD1Q9H9R9 158 aa18.98■□□□□ 0.63
SMC1A-204ENST00000463684 CASP8AP2Q9UKL3 1982 aa18.97■□□□□ 0.63
SMC1A-204ENST00000463684 TRPA1O75762 1119 aa18.97■□□□□ 0.63
SMC1A-204ENST00000463684 RIPK4P57078 832 aa18.97■□□□□ 0.63
SMC1A-204ENST00000463684 EYA3Q99504 573 aa18.96■□□□□ 0.63
SMC1A-204ENST00000463684 RNF186Q9NXI6 227 aa18.96■□□□□ 0.63
SMC1A-204ENST00000463684 ADM5C9JUS6 153 aa18.95■□□□□ 0.62
SMC1A-204ENST00000463684 DLG5Q8TDM6 1919 aa18.95■□□□□ 0.62
SMC1A-204ENST00000463684 ECE2O60344 883 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 EGFRP00533 1210 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 DOK7Q18PE1 504 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 SULF1Q8IWU6 871 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 POLLQ9UGP5 575 aa18.94■□□□□ 0.62
SMC1A-204ENST00000463684 G3V3G9 751 aa18.93■□□□□ 0.62
SMC1A-204ENST00000463684 SOX10P56693 466 aa18.93■□□□□ 0.62
SMC1A-204ENST00000463684 GPSM2P81274 684 aa18.93■□□□□ 0.62
SMC1A-204ENST00000463684 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
SMC1A-204ENST00000463684 KIF4BQ2VIQ3 1234 aa18.93■□□□□ 0.62
SMC1A-204ENST00000463684 DCAF8Q5TAQ9 597 aa18.93■□□□□ 0.62
SMC1A-204ENST00000463684 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
SMC1A-204ENST00000463684 ANKRD36CQ5JPF3 1778 aa18.92■□□□□ 0.62
SMC1A-204ENST00000463684 SLC10A3P09131 477 aa18.92■□□□□ 0.62
SMC1A-204ENST00000463684 REM2Q8IYK8 340 aaPredicted RBP18.92■□□□□ 0.62
SMC1A-204ENST00000463684 FAM89AQ96GI7 184 aa18.92■□□□□ 0.62
SMC1A-204ENST00000463684 CSRNP1Q96S65 589 aa18.92■□□□□ 0.62
SMC1A-204ENST00000463684 ZC3H12CQ9C0D7 883 aaKnown RBP18.92■□□□□ 0.62
SMC1A-204ENST00000463684 KCNQ5Q9NR82 932 aa18.92■□□□□ 0.62
SMC1A-204ENST00000463684 ANKRD13DQ6ZTN6 518 aa18.91■□□□□ 0.62
SMC1A-204ENST00000463684 CTU1Q7Z7A3 348 aaKnown RBP18.91■□□□□ 0.62
SMC1A-204ENST00000463684 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
SMC1A-204ENST00000463684 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
SMC1A-204ENST00000463684 DUOX1Q9NRD9 1551 aa18.9■□□□□ 0.62
SMC1A-204ENST00000463684 VIL1P09327 827 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms