RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 WDR90Q96KV7 1748 aa16.8■□□□□ 0.28
NIN-208ENST00000463419 DICER1Q9UPY3 1922 aaKnown RBP16.79■□□□□ 0.28
NIN-208ENST00000463419 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
NIN-208ENST00000463419 PPEF1O14829 653 aaPredicted RBP16.79■□□□□ 0.28
NIN-208ENST00000463419 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
NIN-208ENST00000463419 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
NIN-208ENST00000463419 PSMD1Q99460 953 aa16.79■□□□□ 0.28
NIN-208ENST00000463419 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
NIN-208ENST00000463419 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
NIN-208ENST00000463419 SH3TC1Q8TE82 1336 aa16.79■□□□□ 0.28
NIN-208ENST00000463419 ATP5J2-PTCD1G3V325 749 aa16.78■□□□□ 0.28
NIN-208ENST00000463419 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
NIN-208ENST00000463419 WWC1Q8IX03 1113 aa16.78■□□□□ 0.28
NIN-208ENST00000463419 TSPYL6Q8N831 410 aa16.78■□□□□ 0.28
NIN-208ENST00000463419 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
NIN-208ENST00000463419 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
NIN-208ENST00000463419 ABCC4O15439 1325 aa16.78■□□□□ 0.28
NIN-208ENST00000463419 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
NIN-208ENST00000463419 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
NIN-208ENST00000463419 FZD9O00144 591 aa16.75■□□□□ 0.27
NIN-208ENST00000463419 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
NIN-208ENST00000463419 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
NIN-208ENST00000463419 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
NIN-208ENST00000463419 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
NIN-208ENST00000463419 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
NIN-208ENST00000463419 HTRA3P83110 453 aa16.74■□□□□ 0.27
NIN-208ENST00000463419 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
NIN-208ENST00000463419 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
NIN-208ENST00000463419 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
NIN-208ENST00000463419 L3MBTL3Q96JM7 780 aaPredicted RBP16.74■□□□□ 0.27
NIN-208ENST00000463419 COL4A5P29400 1685 aa16.74■□□□□ 0.27
NIN-208ENST00000463419 RTL5Q5HYW3 569 aaPredicted RBP16.73■□□□□ 0.27
NIN-208ENST00000463419 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
NIN-208ENST00000463419 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
NIN-208ENST00000463419 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
NIN-208ENST00000463419 IL16Q14005 1332 aa16.73■□□□□ 0.27
NIN-208ENST00000463419 LAMB2P55268 1798 aa16.73■□□□□ 0.27
NIN-208ENST00000463419 BBOX1O75936 387 aa16.72■□□□□ 0.27
NIN-208ENST00000463419 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
NIN-208ENST00000463419 GRAPQ13588 217 aa16.72■□□□□ 0.27
NIN-208ENST00000463419 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
NIN-208ENST00000463419 MYD88Q99836 296 aa16.72■□□□□ 0.27
NIN-208ENST00000463419 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
NIN-208ENST00000463419 TMX4Q9H1E5 349 aaPredicted RBP16.72■□□□□ 0.27
NIN-208ENST00000463419 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
NIN-208ENST00000463419 IQCA1LA6NCM1 817 aa16.71■□□□□ 0.27
NIN-208ENST00000463419 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
NIN-208ENST00000463419 SP8Q8IXZ3 490 aa16.71■□□□□ 0.27
NIN-208ENST00000463419 LARGE2Q8N3Y3 721 aa16.71■□□□□ 0.27
NIN-208ENST00000463419 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
NIN-208ENST00000463419 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
NIN-208ENST00000463419 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
NIN-208ENST00000463419 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 SF3B3Q15393 1217 aaKnown RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 GPC2Q8N158 579 aa16.7■□□□□ 0.26
NIN-208ENST00000463419 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 AOC3Q16853 763 aa16.7■□□□□ 0.26
NIN-208ENST00000463419 DPP8Q6V1X1 898 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
NIN-208ENST00000463419 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
NIN-208ENST00000463419 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
NIN-208ENST00000463419 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 MPNDQ8N594 471 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
NIN-208ENST00000463419 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 MAP3K2Q9Y2U5 619 aa16.69■□□□□ 0.26
NIN-208ENST00000463419 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
NIN-208ENST00000463419 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
NIN-208ENST00000463419 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
NIN-208ENST00000463419 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
NIN-208ENST00000463419 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
NIN-208ENST00000463419 EPHX2P34913 555 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 G2E3Q7L622 706 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 LDHDQ86WU2 507 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
NIN-208ENST00000463419 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
NIN-208ENST00000463419 CWC25Q9NXE8 425 aaPredicted RBP16.67■□□□□ 0.26
NIN-208ENST00000463419 COL4A1P02462 1669 aa16.66■□□□□ 0.26
NIN-208ENST00000463419 SCN4AP35499 1836 aa16.66■□□□□ 0.26
NIN-208ENST00000463419 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
NIN-208ENST00000463419 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
NIN-208ENST00000463419 ASTLQ6HA08 431 aaPredicted RBP16.66■□□□□ 0.26
NIN-208ENST00000463419 KLRG1Q96E93 195 aa16.66■□□□□ 0.26
NIN-208ENST00000463419 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
NIN-208ENST00000463419 DUOX1Q9NRD9 1551 aa16.65■□□□□ 0.26
NIN-208ENST00000463419 TAF1P21675 1872 aa16.64■□□□□ 0.25
NIN-208ENST00000463419 VAMP4O75379 141 aa16.64■□□□□ 0.25
NIN-208ENST00000463419 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
NIN-208ENST00000463419 SCNN1DP51172 638 aa16.64■□□□□ 0.25
NIN-208ENST00000463419 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms