RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 JDP2Q8WYK2 163 aa24.12■■□□□ 1.45
SLC6A1-204ENST00000462473 LAMB2P55268 1798 aa24.11■■□□□ 1.45
SLC6A1-204ENST00000462473 PDE8AO60658 829 aa24.11■■□□□ 1.45
SLC6A1-204ENST00000462473 TMC4Q7Z404 712 aa24.11■■□□□ 1.45
SLC6A1-204ENST00000462473 DICER1Q9UPY3 1922 aaKnown RBP24.11■■□□□ 1.45
SLC6A1-204ENST00000462473 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 NEURL1BA8MQ27 555 aa24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 VEGFAP15692 232 aaPredicted RBP24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 SLFN5Q08AF3 891 aa24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 MIER1Q8N108 512 aa24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 CELF1Q92879 486 aaKnown RBP24.1■■□□□ 1.45
SLC6A1-204ENST00000462473 DDNO94850 711 aaPredicted RBP24.09■■□□□ 1.45
SLC6A1-204ENST00000462473 CCDC152Q4G0S7 254 aa24.09■■□□□ 1.45
SLC6A1-204ENST00000462473 DPP8Q6V1X1 898 aaPredicted RBP24.09■■□□□ 1.45
SLC6A1-204ENST00000462473 MPNDQ8N594 471 aa24.09■■□□□ 1.45
SLC6A1-204ENST00000462473 CDHR2Q9BYE9 1310 aa24.09■■□□□ 1.45
SLC6A1-204ENST00000462473 LARGE2Q8N3Y3 721 aa24.08■■□□□ 1.45
SLC6A1-204ENST00000462473 SUPT20HQ8NEM7 779 aa24.08■■□□□ 1.45
SLC6A1-204ENST00000462473 LINS1Q8NG48 757 aa24.07■■□□□ 1.44
SLC6A1-204ENST00000462473 RBM46Q8TBY0 533 aaKnown RBP24.07■■□□□ 1.44
SLC6A1-204ENST00000462473 CDCA7LQ96GN5 454 aa24.07■■□□□ 1.44
SLC6A1-204ENST00000462473 CACNA1FO60840 1977 aa24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 F6X3S4 739 aa24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 FZD9O00144 591 aa24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 RPS8P62241 208 aaKnown RBP24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 GCKRQ14397 625 aa24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 CCDC85AQ96PX6 553 aaPredicted RBP24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 SEC31BQ9NQW1 1179 aa24.06■■□□□ 1.44
SLC6A1-204ENST00000462473 PPIP5K2O43314 1243 aa24.05■■□□□ 1.44
SLC6A1-204ENST00000462473 UBE3BQ7Z3V4 1068 aa24.05■■□□□ 1.44
SLC6A1-204ENST00000462473 RTFDC1Q9BY42 306 aaPredicted RBP24.05■■□□□ 1.44
SLC6A1-204ENST00000462473 VPS33BQ9H267 617 aa24.05■■□□□ 1.44
SLC6A1-204ENST00000462473 ZNF541Q9H0D2 1346 aa24.05■■□□□ 1.44
SLC6A1-204ENST00000462473 POTECB2RU33 542 aa24.04■■□□□ 1.44
SLC6A1-204ENST00000462473 H7C1W4 665 aa24.04■■□□□ 1.44
SLC6A1-204ENST00000462473 EIF6P56537 245 aaKnown RBP24.04■■□□□ 1.44
SLC6A1-204ENST00000462473 CTSWP56202 376 aa24.03■■□□□ 1.44
SLC6A1-204ENST00000462473 AOC3Q16853 763 aa24.03■■□□□ 1.44
SLC6A1-204ENST00000462473 NIM1KQ8IY84 436 aa24.03■■□□□ 1.44
SLC6A1-204ENST00000462473 NSFL1CQ9UNZ2 370 aaKnown RBP24.03■■□□□ 1.44
SLC6A1-204ENST00000462473 TAF1P21675 1872 aa24.02■■□□□ 1.44
SLC6A1-204ENST00000462473 HSPA6P17066 643 aa24.02■■□□□ 1.44
SLC6A1-204ENST00000462473 WDR90Q96KV7 1748 aa24.01■■□□□ 1.43
SLC6A1-204ENST00000462473 BEND3Q5T5X7 828 aa24.01■■□□□ 1.43
SLC6A1-204ENST00000462473 MRPL50Q8N5N7 158 aaKnown RBP24.01■■□□□ 1.43
SLC6A1-204ENST00000462473 TTLL11Q8NHH1 800 aa24.01■■□□□ 1.43
SLC6A1-204ENST00000462473 IQCA1LA6NCM1 817 aa24■■□□□ 1.43
SLC6A1-204ENST00000462473 FSTL1Q12841 308 aa24■■□□□ 1.43
SLC6A1-204ENST00000462473 SLC4A10Q6U841 1118 aa24■■□□□ 1.43
SLC6A1-204ENST00000462473 ANKRD18AQ8IVF6 992 aa24■■□□□ 1.43
SLC6A1-204ENST00000462473 TRMT2AQ8IZ69 625 aaKnown RBP24■■□□□ 1.43
SLC6A1-204ENST00000462473 SMC1BQ8NDV3 1235 aa24■■□□□ 1.43
SLC6A1-204ENST00000462473 L3MBTL3Q96JM7 780 aaPredicted RBP24■■□□□ 1.43
SLC6A1-204ENST00000462473 GPSM2P81274 684 aa23.99■■□□□ 1.43
SLC6A1-204ENST00000462473 KIAA2012Q0VF49 1180 aa23.99■■□□□ 1.43
SLC6A1-204ENST00000462473 GPC2Q8N158 579 aa23.99■■□□□ 1.43
SLC6A1-204ENST00000462473 CDC5LQ99459 802 aaKnown RBP23.99■■□□□ 1.43
SLC6A1-204ENST00000462473 GJA3Q9Y6H8 435 aa23.99■■□□□ 1.43
SLC6A1-204ENST00000462473 SSH1Q8WYL5 1049 aa23.98■■□□□ 1.43
SLC6A1-204ENST00000462473 PLA2G12BQ9BX93 195 aa23.98■■□□□ 1.43
SLC6A1-204ENST00000462473 COL4A5P29400 1685 aa23.98■■□□□ 1.43
SLC6A1-204ENST00000462473 C6orf229H3BNL8 230 aa23.97■■□□□ 1.43
SLC6A1-204ENST00000462473 CASP7P55210 303 aa23.97■■□□□ 1.43
SLC6A1-204ENST00000462473 GREM2Q9H772 168 aa23.97■■□□□ 1.43
SLC6A1-204ENST00000462473 ZNRF3Q9ULT6 936 aa23.97■■□□□ 1.43
SLC6A1-204ENST00000462473 COL4A1P02462 1669 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 WASHC4Q2M389 1173 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 BCL2L13Q9BXK5 485 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 SRCIN1Q9C0H9 1055 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 ANKIB1Q9P2G1 1089 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 POLLQ9UGP5 575 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 HACL1Q9UJ83 578 aa23.96■■□□□ 1.43
SLC6A1-204ENST00000462473 ALDH1L2Q3SY69 923 aa23.95■■□□□ 1.42
SLC6A1-204ENST00000462473 EYA3Q99504 573 aa23.95■■□□□ 1.42
SLC6A1-204ENST00000462473 PTPRCP08575 1304 aa23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 LRRC37AA6NMS7 1700 aa23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 RIMBP2O15034 1052 aa23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 ALDH1L1O75891 902 aa23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 CT47B1P0C2W7 299 aaPredicted RBP23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 TAF1DQ9H5J8 278 aaPredicted RBP23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 PODXL2Q9NZ53 605 aa23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 C9orf78Q9NZ63 289 aaPredicted RBP23.94■■□□□ 1.42
SLC6A1-204ENST00000462473 RTL9Q8NET4 1388 aa23.93■■□□□ 1.42
SLC6A1-204ENST00000462473 TBC1D16Q8TBP0 767 aa23.93■■□□□ 1.42
SLC6A1-204ENST00000462473 SMC4Q9NTJ3 1288 aa23.93■■□□□ 1.42
SLC6A1-204ENST00000462473 GRM8O00222 908 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 CSF1RP07333 972 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 ITGA6P23229 1130 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 LMOD1P29536 600 aaPredicted RBP23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 EPHX2P34913 555 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 IGHMBP2P38935 993 aaKnown RBP23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 APLP1P51693 650 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 BSDC1Q9NW68 430 aaPredicted RBP23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 GGA1Q9UJY5 639 aa23.92■■□□□ 1.42
SLC6A1-204ENST00000462473 DUOX1Q9NRD9 1551 aa23.91■■□□□ 1.42
SLC6A1-204ENST00000462473 UFL1O94874 794 aa23.91■■□□□ 1.42
SLC6A1-204ENST00000462473 CXCL9Q07325 125 aa23.91■■□□□ 1.42
SLC6A1-204ENST00000462473 FAM161AQ3B820 660 aa23.91■■□□□ 1.42
SLC6A1-204ENST00000462473 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
SLC6A1-204ENST00000462473 ZC3H12CQ9C0D7 883 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms