RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TTLL11Q8NHH1 800 aa16.82■□□□□ 0.28
PBRM1-219ENST00000462207 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
PBRM1-219ENST00000462207 GREM2Q9H772 168 aa16.82■□□□□ 0.28
PBRM1-219ENST00000462207 ANKRD31Q8N7Z5 1873 aa16.81■□□□□ 0.28
PBRM1-219ENST00000462207 CSF1RP07333 972 aa16.81■□□□□ 0.28
PBRM1-219ENST00000462207 ST5P78524 1137 aa16.81■□□□□ 0.28
PBRM1-219ENST00000462207 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
PBRM1-219ENST00000462207 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
PBRM1-219ENST00000462207 MTFR1LQ9H019 292 aa16.8■□□□□ 0.28
PBRM1-219ENST00000462207 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
PBRM1-219ENST00000462207 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
PBRM1-219ENST00000462207 RIC1Q4ADV7 1423 aa16.8■□□□□ 0.28
PBRM1-219ENST00000462207 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
PBRM1-219ENST00000462207 HMMRO75330 724 aa16.79■□□□□ 0.28
PBRM1-219ENST00000462207 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
PBRM1-219ENST00000462207 ITGA6P23229 1130 aa16.78■□□□□ 0.28
PBRM1-219ENST00000462207 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
PBRM1-219ENST00000462207 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
PBRM1-219ENST00000462207 EXOC6BQ9Y2D4 811 aa16.78■□□□□ 0.28
PBRM1-219ENST00000462207 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.28
PBRM1-219ENST00000462207 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
PBRM1-219ENST00000462207 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
PBRM1-219ENST00000462207 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
PBRM1-219ENST00000462207 SIL1Q9H173 461 aa16.77■□□□□ 0.28
PBRM1-219ENST00000462207 LRP5O75197 1615 aa16.77■□□□□ 0.28
PBRM1-219ENST00000462207 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
PBRM1-219ENST00000462207 APBB1O00213 710 aa16.76■□□□□ 0.27
PBRM1-219ENST00000462207 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
PBRM1-219ENST00000462207 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
PBRM1-219ENST00000462207 TAF1P21675 1872 aa16.76■□□□□ 0.27
PBRM1-219ENST00000462207 SOCS7O14512 581 aa16.76■□□□□ 0.27
PBRM1-219ENST00000462207 IFIT5Q13325 482 aaKnown RBP16.76■□□□□ 0.27
PBRM1-219ENST00000462207 CENPQQ7L2Z9 268 aaPredicted RBP16.76■□□□□ 0.27
PBRM1-219ENST00000462207 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
PBRM1-219ENST00000462207 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
PBRM1-219ENST00000462207 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
PBRM1-219ENST00000462207 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
PBRM1-219ENST00000462207 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
PBRM1-219ENST00000462207 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
PBRM1-219ENST00000462207 DCTPP1Q9H773 170 aa16.75■□□□□ 0.27
PBRM1-219ENST00000462207 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 PTGER2P43116 358 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 CRY2Q49AN0 593 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
PBRM1-219ENST00000462207 POLD1P28340 1107 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 SKAP1Q86WV1 359 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
PBRM1-219ENST00000462207 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
PBRM1-219ENST00000462207 TAF7LQ5H9L4 462 aa16.73■□□□□ 0.27
PBRM1-219ENST00000462207 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 SLC51AQ86UW1 340 aa16.72■□□□□ 0.27
PBRM1-219ENST00000462207 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
PBRM1-219ENST00000462207 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 SMARCA5O60264 1052 aaPredicted RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 GCC1Q96CN9 775 aa16.72■□□□□ 0.27
PBRM1-219ENST00000462207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
PBRM1-219ENST00000462207 CHRNA5P30532 468 aa16.71■□□□□ 0.27
PBRM1-219ENST00000462207 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
PBRM1-219ENST00000462207 KIF13BQ9NQT8 1826 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 PDE6BP35913 854 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
PBRM1-219ENST00000462207 ATG9AQ7Z3C6 839 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 EYA2O00167 538 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 SRGNP10124 158 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
PBRM1-219ENST00000462207 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 C2CD5Q86YS7 1000 aa16.7■□□□□ 0.26
PBRM1-219ENST00000462207 CDC5LQ99459 802 aaKnown RBP16.7■□□□□ 0.26
PBRM1-219ENST00000462207 SASH1O94885 1247 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 RHPN1Q8TCX5 695 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
PBRM1-219ENST00000462207 NUCB1Q02818 461 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 GRAPQ13588 217 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
PBRM1-219ENST00000462207 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
PBRM1-219ENST00000462207 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 CIAO1O76071 339 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 HOXA10P31260 410 aaPredicted RBP16.68■□□□□ 0.26
PBRM1-219ENST00000462207 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
PBRM1-219ENST00000462207 HSP90AB4PQ58FF6 505 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 LRRCC1Q9C099 1032 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
PBRM1-219ENST00000462207 RAB11FIP3O75154 756 aa16.67■□□□□ 0.26
PBRM1-219ENST00000462207 NPR1P16066 1061 aa16.67■□□□□ 0.26
PBRM1-219ENST00000462207 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
PBRM1-219ENST00000462207 TFCP2Q12800 502 aa16.67■□□□□ 0.26
PBRM1-219ENST00000462207 PPP1R1BQ9UD71 204 aaPredicted RBP16.67■□□□□ 0.26
PBRM1-219ENST00000462207 CACNA1SQ13698 1873 aa16.67■□□□□ 0.26
PBRM1-219ENST00000462207 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
PBRM1-219ENST00000462207 DLEC1Q9Y238 1755 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms