RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TRPM7Q96QT4 1865 aa8.08□□□□□ -1.12
SMARCC1-204ENST00000462198 ADAMTSL1Q8N6G6 1762 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 THSD7BQ9C0I4 1608 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 C2orf72A6NCS6 295 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 DLL1O00548 723 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 PDE6BP35913 854 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 CIAPIN1Q6FI81 312 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 UBE2Q2Q8WVN8 375 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 GGNBP2Q9H3C7 697 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 NARFQ9UHQ1 456 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 PDZRN3Q9UPQ7 1066 aa8.07□□□□□ -1.12
SMARCC1-204ENST00000462198 NRXN2Q9P2S2 1712 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 RNF123Q5XPI4 1314 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 SLX4Q8IY92 1834 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 FYB1O15117 783 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 GPR37O15354 613 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 CABP4P57796 275 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
SMARCC1-204ENST00000462198 ZNF541Q9H0D2 1346 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 TRAF5O00463 557 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 BICDL1Q6ZP65 573 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 SAPCD2Q86UD0 394 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 EYA1Q99502 592 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 CARMIL3Q8ND23 1372 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
SMARCC1-204ENST00000462198 NFATC2IPQ8NCF5 419 aa8.04□□□□□ -1.12
SMARCC1-204ENST00000462198 FLT4P35916 1363 aa8.04□□□□□ -1.12
SMARCC1-204ENST00000462198 CACNA1SQ13698 1873 aa8.04□□□□□ -1.12
SMARCC1-204ENST00000462198 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 ANKRD31Q8N7Z5 1873 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 FZD9O00144 591 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 PPM1GO15355 546 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 HSP90AB1P08238 724 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 FXR1P51114 621 aaKnown RBP eCLIP8.03□□□□□ -1.125e-9■□□□□ 10.2
SMARCC1-204ENST00000462198 STYK1Q6J9G0 422 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 DNAJC10Q8IXB1 793 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 GPC2Q8N158 579 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 HHIPL1Q96JK4 782 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 ZIC5Q96T25 663 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 ZNF277Q9NRM2 450 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-204ENST00000462198 KIF24Q5T7B8 1368 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 CELF2O95319 508 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 LMOD1P29536 600 aaPredicted RBP8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 EPS15P42566 896 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 PSEN2P49810 448 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 PDIA6Q15084 440 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 ERICH6BQ5W0A0 696 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 EMILIN1Q9Y6C2 1016 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 GJA3Q9Y6H8 435 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 NCAPD2Q15021 1401 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 WASHC2AQ641Q2 1341 aa8.02□□□□□ -1.13
SMARCC1-204ENST00000462198 ANKRD26Q9UPS8 1709 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 SRGNP10124 158 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 CYP19A1P11511 503 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 MTHFSP49914 203 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 NOGQ13253 232 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 CCDC93Q567U6 631 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 TBC1D9BQ66K14 1250 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 PRR5LQ6MZQ0 368 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 CTU1Q7Z7A3 348 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 MASTLQ96GX5 879 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 HPS5Q9UPZ3 1129 aa8.01□□□□□ -1.13
SMARCC1-204ENST00000462198 SPDYE16A6NNV3 312 aaPredicted RBP8□□□□□ -1.13
SMARCC1-204ENST00000462198 TRPA1O75762 1119 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
SMARCC1-204ENST00000462198 AKAP4Q5JQC9 854 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 USP50Q70EL3 339 aaPredicted RBP8□□□□□ -1.13
SMARCC1-204ENST00000462198 SYNE4Q8N205 404 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 SLC17A8Q8NDX2 589 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 PANK3Q9H999 370 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 TJP1Q07157 1748 aa8□□□□□ -1.13
SMARCC1-204ENST00000462198 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 CUL9Q8IWT3 2517 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 COL15A1P39059 1388 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 NPHP1O15259 732 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 COL11A2P13942 1736 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 CANXP27824 592 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 EIF6P56537 245 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 FLIIQ13045 1269 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 OLFM4Q6UX06 510 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 RTKN2Q8IZC4 609 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 JDP2Q8WYK2 163 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 ZNF408Q9H9D4 720 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 RNF186Q9NXI6 227 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 SAGE1Q9NXZ1 904 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms