RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 VPS18Q9P253 973 aa10.73□□□□□ -0.69
LINC01140-201ENST00000461990 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
LINC01140-201ENST00000461990 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
LINC01140-201ENST00000461990 COL3A1P02461 1466 aaPredicted RBP10.72□□□□□ -0.69
LINC01140-201ENST00000461990 GNAI3P08754 354 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
LINC01140-201ENST00000461990 CCDC30Q5VVM6 783 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 TRIM65Q6PJ69 517 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 TEX11Q8IYF3 940 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 PTPRTO14522 1441 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 NSD3Q9BZ95 1437 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 ANKRD44Q8N8A2 993 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
LINC01140-201ENST00000461990 GIMAP7Q8NHV1 300 aa10.72□□□□□ -0.69
LINC01140-201ENST00000461990 EIF3JO75822 258 aaKnown RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 MRPL12P52815 198 aaKnown RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 GNAI1P63096 354 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 CRYMQ14894 314 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 FAM71BQ8TC56 605 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 TATDN2Q93075 761 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 DDX11Q96FC9 970 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 CALR3Q96L12 384 aaKnown RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 TTC14Q96N46 770 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 PARD6BQ9BYG5 372 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 NSD2O96028 1365 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 PSME1Q06323 249 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 CWC27Q6UX04 472 aaKnown RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 POTEDQ86YR6 584 aa10.71□□□□□ -0.69
LINC01140-201ENST00000461990 OTUD7AQ8TE49 926 aaPredicted RBP10.71□□□□□ -0.69
LINC01140-201ENST00000461990 CTAGE5O15320 804 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 VPS53Q5VIR6 699 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 HDXQ7Z353 690 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 TTC6Q86TZ1 520 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 NUTM1Q86Y26 1132 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 CARD6Q9BX69 1037 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 DNAJC25Q9H1X3 360 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.7
LINC01140-201ENST00000461990 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 MTHFSP49914 203 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
LINC01140-201ENST00000461990 GRIK3Q13003 919 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
LINC01140-201ENST00000461990 USP16Q9Y5T5 823 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 NPHP3Q7Z494 1330 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 ICA1Q05084 483 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 PREPLQ4J6C6 727 aaPredicted RBP10.7□□□□□ -0.7
LINC01140-201ENST00000461990 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
LINC01140-201ENST00000461990 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
LINC01140-201ENST00000461990 MPHOSPH8Q99549 860 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 VEZTQ9HBM0 779 aa10.7□□□□□ -0.7
LINC01140-201ENST00000461990 CDK12Q9NYV4 1490 aaPredicted RBP10.69□□□□□ -0.7
LINC01140-201ENST00000461990 TXLNAP40222 546 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 KRT85P78386 507 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 ADCY2Q08462 1091 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 SCRN1Q12765 414 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
LINC01140-201ENST00000461990 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 PDE11AQ9HCR9 933 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 DACT1Q9NYF0 836 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 RAB21Q9UL25 225 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 CDC42BPGQ6DT37 1551 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 TRPM2O94759 1503 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 EXOC5O00471 708 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 FANCGO15287 622 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 HSPA4P34932 840 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 FAM69CQ0P6D2 419 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 CAMK4Q16566 473 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 WLSQ5T9L3 541 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 FCHSD1Q86WN1 690 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 SMC3Q9UQE7 1217 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 RTN2O75298 545 aa10.69□□□□□ -0.7
LINC01140-201ENST00000461990 CPLX2Q6PUV4 134 aaKnown RBP10.69□□□□□ -0.7
LINC01140-201ENST00000461990 TEX13AQ9BXU3 409 aaPredicted RBP10.69□□□□□ -0.7
LINC01140-201ENST00000461990 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 SHOX2O60902 331 aaPredicted RBP10.68□□□□□ -0.7
LINC01140-201ENST00000461990 ETAA1Q9NY74 926 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 FAN1Q9Y2M0 1017 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 MRFAP1Q9Y605 127 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 TUBB4BP68371 445 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 TBC1D8BQ0IIM8 1120 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 CNNM3Q8NE01 707 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 GOLGA1Q92805 767 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 SCAND2PQ9GZW5 306 aaPredicted RBP10.68□□□□□ -0.7
LINC01140-201ENST00000461990 SALL3Q9BXA9 1300 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 KIAA0232Q92628 1395 aa10.68□□□□□ -0.7
LINC01140-201ENST00000461990 PREX1Q8TCU6 1659 aa10.67□□□□□ -0.7
LINC01140-201ENST00000461990 NRDCO43847 1150 aa10.67□□□□□ -0.7
LINC01140-201ENST00000461990 U2AF1L5P0DN76 240 aaPredicted RBP10.67□□□□□ -0.7
LINC01140-201ENST00000461990 U2AF1Q01081 240 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC01140-201ENST00000461990 NAIF1Q69YI7 327 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms