RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PGBD3Q8N328 593 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 ALKBH8Q96BT7 664 aaKnown RBP5.09□□□□□ -1.59
VCL-203ENST00000461383 DCAF5Q96JK2 942 aa5.09□□□□□ -1.59
VCL-203ENST00000461383 FNDC3AQ9Y2H6 1198 aaKnown RBP5.09□□□□□ -1.59
VCL-203ENST00000461383 CNTNAP5Q8WYK1 1306 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 TCF3P15923 654 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 EPB42P16452 691 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 ARSDP51689 593 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 PSMD2Q13200 908 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 PLA2G4EQ3MJ16 856 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 IER5Q5VY09 327 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 ALG1LQ6GMV1 187 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 PODNQ7Z5L7 613 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 ALYREFQ86V81 257 aaKnown RBP5.08□□□□□ -1.6
VCL-203ENST00000461383 CMTR1Q8N1G2 835 aaKnown RBP5.08□□□□□ -1.6
VCL-203ENST00000461383 BEND7Q8N7W2 519 aaPredicted RBP5.08□□□□□ -1.6
VCL-203ENST00000461383 ZNF280CQ8ND82 737 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 DUSP9Q99956 384 aaKnown RBP5.08□□□□□ -1.6
VCL-203ENST00000461383 GPAMQ9HCL2 828 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 BCS1LQ9Y276 419 aa5.08□□□□□ -1.6
VCL-203ENST00000461383 PROCP04070 461 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 VAMP1P23763 118 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 MSX1P28360 303 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 ZNF438Q7Z4V0 828 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 BTLAQ7Z6A9 289 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 CEP63Q96MT8 703 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 OXCT2Q9BYC2 517 aaPredicted RBP5.07□□□□□ -1.6
VCL-203ENST00000461383 CRISPLD1Q9H336 500 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 NDFIP2Q9NV92 336 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 VTI1BQ9UEU0 232 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 PARP2Q9UGN5 583 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 WWC3Q9ULE0 1092 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 PHF24Q9UPV7 400 aa5.07□□□□□ -1.6
VCL-203ENST00000461383 A0A1W2PNR3 127 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 A6NHS1 94 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 UBAP1LF5GYI3 381 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 SORBS3O60504 671 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 ATP4AP20648 1035 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 ORC1Q13415 861 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 ENOX2Q16206 610 aaKnown RBP5.06□□□□□ -1.6
VCL-203ENST00000461383 NEDD1Q8NHV4 660 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 FAM161BQ96MY7 647 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 CSRNP1Q96S65 589 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 ZIC5Q96T25 663 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 SPOCK3Q9BQ16 436 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 GGNBP2Q9H3C7 697 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 GDF2Q9UK05 429 aaPredicted RBP5.06□□□□□ -1.6
VCL-203ENST00000461383 ATXN7L1Q9ULK2 861 aaPredicted RBP5.06□□□□□ -1.6
VCL-203ENST00000461383 USP20Q9Y2K6 914 aa5.06□□□□□ -1.6
VCL-203ENST00000461383 EIF1AYO14602 144 aaKnown RBP5.05□□□□□ -1.6
VCL-203ENST00000461383 MSTNO14793 375 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 OPLAHO14841 1288 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 CPNE3O75131 537 aaKnown RBP5.05□□□□□ -1.6
VCL-203ENST00000461383 RECKO95980 971 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 EFHC2Q5JST6 749 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 SLCO4C1Q6ZQN7 724 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 FBF1Q8TES7 1133 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 KLRG1Q96E93 195 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 RUBCNLQ9H714 662 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 SPG7Q9UQ90 795 aa5.05□□□□□ -1.6
VCL-203ENST00000461383 RTCBQ9Y3I0 505 aaKnown RBP5.05□□□□□ -1.6
VCL-203ENST00000461383 SHISA8B8ZZ34 492 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 ADAM23O75077 832 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 PHACTR2O75167 634 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 IGHA2P01877 340 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 HOXB4P17483 251 aaPredicted RBP5.04□□□□□ -1.6
VCL-203ENST00000461383 INPP5BP32019 993 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 DAB2P98082 770 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 TMC4Q7Z404 712 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 GOLGA6L1Q8N7Z2 621 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 TMEM87AQ8NBN3 555 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 SNX29Q8TEQ0 813 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 C7orf43Q8WVR3 580 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 SETDB2Q96T68 719 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 BACH2Q9BYV9 841 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 DNAJC25Q9H1X3 360 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 BRD7Q9NPI1 651 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 NLRP2Q9NX02 1062 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 USP35Q9P2H5 1018 aa5.04□□□□□ -1.6
VCL-203ENST00000461383 DMGDHQ9UI17 866 aaKnown RBP5.04□□□□□ -1.6
VCL-203ENST00000461383 SCAMP3O14828 347 aaKnown RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 TNFRSF21O75509 655 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 GNA15P30679 374 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 SNRPNP63162 240 aaKnown RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 TYRO3Q06418 890 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 MRPL58Q14197 206 aaKnown RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 PDE12Q6L8Q7 609 aaKnown RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 C1orf229Q6ZS94 237 aaPredicted RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 FRMD6Q96NE9 622 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 IGSF5Q9NSI5 407 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 FOXD3Q9UJU5 478 aaPredicted RBP5.03□□□□□ -1.6
VCL-203ENST00000461383 MKL2Q9ULH7 1088 aa5.03□□□□□ -1.6
VCL-203ENST00000461383 C2CD2LO14523 706 aa5.02□□□□□ -1.61
VCL-203ENST00000461383 XYLBO75191 536 aa5.02□□□□□ -1.61
VCL-203ENST00000461383 FGFR3P22607 806 aa5.02□□□□□ -1.61
VCL-203ENST00000461383 ERCC5P28715 1186 aaPredicted RBP5.02□□□□□ -1.61
VCL-203ENST00000461383 TTC39BQ5VTQ0 682 aaPredicted RBP5.02□□□□□ -1.61
VCL-203ENST00000461383 FIGNL1Q6PIW4 674 aa5.02□□□□□ -1.61
VCL-203ENST00000461383 NLRP8Q86W28 1048 aa5.02□□□□□ -1.61
VCL-203ENST00000461383 ELP3Q9H9T3 547 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms