RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
COPS7B-217ENST00000461350 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
COPS7B-217ENST00000461350 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
COPS7B-217ENST00000461350 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
COPS7B-217ENST00000461350 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
COPS7B-217ENST00000461350 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
COPS7B-217ENST00000461350 TRIM6-TRIM34B2RNG4 842 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 FOXO4P98177 505 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 SYCE3A1L190 88 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
COPS7B-217ENST00000461350 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
COPS7B-217ENST00000461350 RABL6Q3YEC7 729 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 HS1BP3Q53T59 392 aa13.5□□□□□ -0.25
COPS7B-217ENST00000461350 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
COPS7B-217ENST00000461350 NOL7Q9UMY1 257 aaKnown RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
COPS7B-217ENST00000461350 AACSQ86V21 672 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 CCDC8Q9H0W5 538 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-217ENST00000461350 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 ERC2O15083 957 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 EIF5P55010 431 aaKnown RBP13.49□□□□□ -0.25
COPS7B-217ENST00000461350 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-217ENST00000461350 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
COPS7B-217ENST00000461350 TMEM63CQ9P1W3 806 aa13.49□□□□□ -0.25
COPS7B-217ENST00000461350 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
COPS7B-217ENST00000461350 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 NEK4P51957 841 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 EAF2Q96CJ1 260 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-217ENST00000461350 ZNF594Q96JF6 807 aaPredicted RBP13.48□□□□□ -0.25
COPS7B-217ENST00000461350 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 TLR7Q9NYK1 1049 aaKnown RBP13.48□□□□□ -0.25
COPS7B-217ENST00000461350 THSD7AQ9UPZ6 1657 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 NOL8Q76FK4 1167 aaKnown RBP13.48□□□□□ -0.25
COPS7B-217ENST00000461350 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
COPS7B-217ENST00000461350 NUP98P52948 1817 aa13.47□□□□□ -0.25
COPS7B-217ENST00000461350 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
COPS7B-217ENST00000461350 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
COPS7B-217ENST00000461350 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
COPS7B-217ENST00000461350 NSFL1CQ9UNZ2 370 aaKnown RBP13.47□□□□□ -0.25
COPS7B-217ENST00000461350 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
COPS7B-217ENST00000461350 ZKSCAN5Q9Y2L8 839 aa13.47□□□□□ -0.25
COPS7B-217ENST00000461350 UQCRHLA0A096LP55 91 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 ZNF500O60304 480 aaPredicted RBP13.46□□□□□ -0.25
COPS7B-217ENST00000461350 UQCRHP07919 91 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 TFCP2Q12800 502 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
COPS7B-217ENST00000461350 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 UBN2Q6ZU65 1347 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 ATRNO75882 1429 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 TERF1P54274 439 aa13.46□□□□□ -0.25
COPS7B-217ENST00000461350 COL15A1P39059 1388 aa13.46□□□□□ -0.26
COPS7B-217ENST00000461350 ZBTB38Q8NAP3 1195 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 BTAF1O14981 1849 aa13.45□□□□□ -0.26
COPS7B-217ENST00000461350 MBD3O95983 291 aa13.45□□□□□ -0.26
COPS7B-217ENST00000461350 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-217ENST00000461350 TMX3Q96JJ7 454 aa13.45□□□□□ -0.26
COPS7B-217ENST00000461350 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
COPS7B-217ENST00000461350 ARID3AQ99856 593 aa13.45□□□□□ -0.26
COPS7B-217ENST00000461350 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
COPS7B-217ENST00000461350 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 CSPP1Q1MSJ5 1256 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
COPS7B-217ENST00000461350 AOX1Q06278 1338 aa13.43□□□□□ -0.26
COPS7B-217ENST00000461350 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
COPS7B-217ENST00000461350 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
COPS7B-217ENST00000461350 CHMLP26374 656 aa13.43□□□□□ -0.26
COPS7B-217ENST00000461350 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
COPS7B-217ENST00000461350 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
COPS7B-217ENST00000461350 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 IL25Q9H293 177 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 CCNL1Q9UK58 526 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 GLRX3O76003 335 aaKnown RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 MCCP23508 829 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 TNNI3KQ59H18 835 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 BOLA2Q9H3K6 86 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 FPGT-TNNI3KV9GXZ4 949 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 TTC41PQ6P2S7 1318 aa13.42□□□□□ -0.26
COPS7B-217ENST00000461350 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-217ENST00000461350 MCM5P33992 734 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms