RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 LARGE2Q8N3Y3 721 aa6.98□□□□□ -1.29
CLK1-206ENST00000461326 NGLY1Q96IV0 654 aa6.98□□□□□ -1.29
CLK1-206ENST00000461326 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
CLK1-206ENST00000461326 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
CLK1-206ENST00000461326 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 PTCD1O75127 700 aaKnown RBP6.97□□□□□ -1.29
CLK1-206ENST00000461326 MAP3K6O95382 1288 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 CLDN10P78369 228 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 GAS2L2Q8NHY3 880 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 TTC9Q92623 222 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 AKTIPQ9H8T0 292 aa6.97□□□□□ -1.29
CLK1-206ENST00000461326 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
CLK1-206ENST00000461326 CD97P48960 835 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 PERM1Q5SV97 790 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
CLK1-206ENST00000461326 OGFOD1Q8N543 542 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 TSEN2Q8NCE0 465 aaKnown RBP6.96□□□□□ -1.3
CLK1-206ENST00000461326 PBXIP1Q96AQ6 731 aa6.96□□□□□ -1.3
CLK1-206ENST00000461326 C2orf49Q9BVC5 232 aaPredicted RBP6.96□□□□□ -1.3
CLK1-206ENST00000461326 ACIN1Q9UKV3 1341 aaKnown RBP6.96□□□□□ -1.3
CLK1-206ENST00000461326 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 GSC2O15499 205 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 RTN1Q16799 776 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 DHX32Q7L7V1 743 aaKnown RBP6.95□□□□□ -1.3
CLK1-206ENST00000461326 SIX5Q8N196 739 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 TRPM4Q8TD43 1214 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 DCAF11Q8TEB1 546 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 PPP1R12CQ9BZL4 782 aa6.95□□□□□ -1.3
CLK1-206ENST00000461326 MRPL18Q9H0U6 180 aaKnown RBP6.95□□□□□ -1.3
CLK1-206ENST00000461326 DLL1O00548 723 aa6.94□□□□□ -1.3
CLK1-206ENST00000461326 C21orf2O43822 256 aa6.94□□□□□ -1.3
CLK1-206ENST00000461326 GPLD1P80108 840 aa6.94□□□□□ -1.3
CLK1-206ENST00000461326 CHMP7Q8WUX9 453 aaPredicted RBP6.94□□□□□ -1.3
CLK1-206ENST00000461326 SCG3Q8WXD2 468 aaKnown RBP6.94□□□□□ -1.3
CLK1-206ENST00000461326 TRAIPQ9BWF2 469 aa6.94□□□□□ -1.3
CLK1-206ENST00000461326 DEAF1O75398 565 aaPredicted RBP6.93□□□□□ -1.3
CLK1-206ENST00000461326 CFAP70Q5T0N1 1121 aa6.93□□□□□ -1.3
CLK1-206ENST00000461326 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
CLK1-206ENST00000461326 TMEM130Q8N3G9 435 aa6.93□□□□□ -1.3
CLK1-206ENST00000461326 SMG9Q9H0W8 520 aaKnown RBP6.93□□□□□ -1.3
CLK1-206ENST00000461326 C11orf16Q9NQ32 467 aa6.93□□□□□ -1.3
CLK1-206ENST00000461326 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
CLK1-206ENST00000461326 RARAP10276 462 aa6.92□□□□□ -1.3
CLK1-206ENST00000461326 TAL1P17542 331 aaPredicted RBP6.92□□□□□ -1.3
CLK1-206ENST00000461326 MLLT1Q03111 559 aaPredicted RBP6.92□□□□□ -1.3
CLK1-206ENST00000461326 ZNF594Q96JF6 807 aaPredicted RBP6.92□□□□□ -1.3
CLK1-206ENST00000461326 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
CLK1-206ENST00000461326 DMGDHQ9UI17 866 aaKnown RBP6.92□□□□□ -1.3
CLK1-206ENST00000461326 KIAA1324LA8MWY0 1029 aaPredicted RBP6.91□□□□□ -1.3
CLK1-206ENST00000461326 ZBTB42B2RXF5 422 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
CLK1-206ENST00000461326 ATP9BO43861 1147 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
CLK1-206ENST00000461326 IDH3AP50213 366 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 PLAURQ03405 335 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 UCN2Q96RP3 112 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 RNF114Q9Y508 228 aa6.91□□□□□ -1.3
CLK1-206ENST00000461326 ZBTB7CA1YPR0 619 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 ALX3O95076 343 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 INPP5BP32019 993 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 ARSDP51689 593 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 NRLP54845 237 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 GP2P55259 537 aaKnown RBP6.9□□□□□ -1.3
CLK1-206ENST00000461326 MAP4K3Q8IVH8 894 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 RETREG2Q8NC44 543 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 BCS1LQ9Y276 419 aa6.9□□□□□ -1.3
CLK1-206ENST00000461326 MAFBQ9Y5Q3 323 aaPredicted RBP6.9□□□□□ -1.3
CLK1-206ENST00000461326 OAS3Q9Y6K5 1087 aaKnown RBP6.9□□□□□ -1.3
CLK1-206ENST00000461326 PATL2C9JE40 543 aaKnown RBP6.89□□□□□ -1.31
CLK1-206ENST00000461326 GLB1P16278 677 aa6.89□□□□□ -1.31
CLK1-206ENST00000461326 TARSP26639 723 aaKnown RBP6.89□□□□□ -1.31
CLK1-206ENST00000461326 SEC13P55735 322 aa6.89□□□□□ -1.31
CLK1-206ENST00000461326 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
CLK1-206ENST00000461326 SASH3O75995 380 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 GRNP28799 593 aaKnown RBP6.88□□□□□ -1.31
CLK1-206ENST00000461326 LMOD1P29536 600 aaPredicted RBP6.88□□□□□ -1.31
CLK1-206ENST00000461326 GRIK1P39086 918 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 Q6ZS46 218 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
CLK1-206ENST00000461326 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
CLK1-206ENST00000461326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.87□□□□□ -1.31
CLK1-206ENST00000461326 DKK1O94907 266 aa6.87□□□□□ -1.31
CLK1-206ENST00000461326 TGFB1P01137 390 aa6.87□□□□□ -1.31
CLK1-206ENST00000461326 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
CLK1-206ENST00000461326 IL22RA1Q8N6P7 574 aa6.87□□□□□ -1.31
CLK1-206ENST00000461326 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
CLK1-206ENST00000461326 DHX15O43143 795 aaKnown RBP6.86□□□□□ -1.31
CLK1-206ENST00000461326 ATG7O95352 703 aa6.86□□□□□ -1.31
CLK1-206ENST00000461326 GHRHP01286 108 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms