RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
COL9A2-205ENST00000461118 ABT1Q9ULW3 272 aaKnown RBP23.79■■□□□ 1.4
COL9A2-205ENST00000461118 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
COL9A2-205ENST00000461118 LMOD1P29536 600 aaPredicted RBP23.78■■□□□ 1.4
COL9A2-205ENST00000461118 SLC10A5Q5PT55 438 aa23.78■■□□□ 1.4
COL9A2-205ENST00000461118 TRAF5O00463 557 aa23.77■■□□□ 1.4
COL9A2-205ENST00000461118 ELL2O00472 640 aaPredicted RBP23.77■■□□□ 1.4
COL9A2-205ENST00000461118 MAP2K1Q02750 393 aaPredicted RBP23.77■■□□□ 1.4
COL9A2-205ENST00000461118 AIMP1Q12904 312 aaKnown RBP23.77■■□□□ 1.4
COL9A2-205ENST00000461118 USP50Q70EL3 339 aaPredicted RBP23.77■■□□□ 1.4
COL9A2-205ENST00000461118 PARP10Q53GL7 1025 aa23.76■■□□□ 1.39
COL9A2-205ENST00000461118 TSR2Q969E8 191 aaKnown RBP23.76■■□□□ 1.39
COL9A2-205ENST00000461118 ATP6V0A2Q9Y487 856 aa23.76■■□□□ 1.39
COL9A2-205ENST00000461118 LRRC37AA6NMS7 1700 aa23.76■■□□□ 1.39
COL9A2-205ENST00000461118 AOC3Q16853 763 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 HSP90AB3PQ58FF7 597 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 PPP1R42Q7Z4L9 355 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 NIM1KQ8IY84 436 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 RTFDC1Q9BY42 306 aaPredicted RBP23.75■■□□□ 1.39
COL9A2-205ENST00000461118 GPRC5DQ9NZD1 345 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 ABCC4O15439 1325 aa23.75■■□□□ 1.39
COL9A2-205ENST00000461118 DDX60Q8IY21 1712 aaKnown RBP23.75■■□□□ 1.39
COL9A2-205ENST00000461118 DUOX1Q9NRD9 1551 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 PLBD2Q8NHP8 589 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 CAPNS2Q96L46 248 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 VPS33BQ9H267 617 aa23.74■■□□□ 1.39
COL9A2-205ENST00000461118 SALL2Q9Y467 1007 aaPredicted RBP23.74■■□□□ 1.39
COL9A2-205ENST00000461118 CXCL9Q07325 125 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 TCIRG1Q13488 830 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 CYP4F22Q6NT55 531 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 ANKRD13DQ6ZTN6 518 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 TLL2Q9Y6L7 1015 aa23.73■■□□□ 1.39
COL9A2-205ENST00000461118 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
COL9A2-205ENST00000461118 CCDC30Q5VVM6 783 aa23.72■■□□□ 1.39
COL9A2-205ENST00000461118 ABHD8Q96I13 439 aa23.72■■□□□ 1.39
COL9A2-205ENST00000461118 UTP14AQ9BVJ6 771 aaKnown RBP23.72■■□□□ 1.39
COL9A2-205ENST00000461118 ADARB2Q9NS39 739 aaKnown RBP23.71■■□□□ 1.39
COL9A2-205ENST00000461118 ZNRF3Q9ULT6 936 aa23.71■■□□□ 1.39
COL9A2-205ENST00000461118 PGAP2Q9UHJ9 254 aa23.7■■□□□ 1.38
COL9A2-205ENST00000461118 POLR2AP24928 1970 aaKnown RBP23.7■■□□□ 1.38
COL9A2-205ENST00000461118 ECE1P42892 770 aa23.69■■□□□ 1.38
COL9A2-205ENST00000461118 NLRP10Q86W26 655 aa23.69■■□□□ 1.38
COL9A2-205ENST00000461118 SP8Q8IXZ3 490 aa23.69■■□□□ 1.38
COL9A2-205ENST00000461118 GPR101Q96P66 508 aaPredicted RBP23.69■■□□□ 1.38
COL9A2-205ENST00000461118 COL4A1P02462 1669 aa23.69■■□□□ 1.38
COL9A2-205ENST00000461118 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
COL9A2-205ENST00000461118 GMPSP49915 693 aaPredicted RBP23.68■■□□□ 1.38
COL9A2-205ENST00000461118 HIRAP54198 1017 aaPredicted RBP23.68■■□□□ 1.38
COL9A2-205ENST00000461118 TWISTNBQ3B726 338 aaPredicted RBP23.68■■□□□ 1.38
COL9A2-205ENST00000461118 PHAXQ9H814 394 aaKnown RBP23.68■■□□□ 1.38
COL9A2-205ENST00000461118 CASP8AP2Q9UKL3 1982 aa23.68■■□□□ 1.38
COL9A2-205ENST00000461118 BBOX1O75936 387 aa23.67■■□□□ 1.38
COL9A2-205ENST00000461118 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
COL9A2-205ENST00000461118 SAPCD2Q86UD0 394 aa23.67■■□□□ 1.38
COL9A2-205ENST00000461118 ZNF521Q96K83 1311 aa23.66■■□□□ 1.38
COL9A2-205ENST00000461118 AOC2O75106 756 aa23.66■■□□□ 1.38
COL9A2-205ENST00000461118 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
COL9A2-205ENST00000461118 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
COL9A2-205ENST00000461118 SUPT20HQ8NEM7 779 aa23.66■■□□□ 1.38
COL9A2-205ENST00000461118 ISCA1Q9BUE6 129 aa23.66■■□□□ 1.38
COL9A2-205ENST00000461118 SPINK5Q9NQ38 1064 aaPredicted RBP23.66■■□□□ 1.38
COL9A2-205ENST00000461118 YDJCA8MPS7 323 aa23.65■■□□□ 1.38
COL9A2-205ENST00000461118 GOLGA2Q08379 1002 aa23.65■■□□□ 1.38
COL9A2-205ENST00000461118 GRM1Q13255 1194 aa23.65■■□□□ 1.38
COL9A2-205ENST00000461118 DPP8Q6V1X1 898 aaPredicted RBP23.65■■□□□ 1.38
COL9A2-205ENST00000461118 PAXIP1Q6ZW49 1069 aaPredicted RBP23.65■■□□□ 1.38
COL9A2-205ENST00000461118 GLIS2Q9BZE0 524 aaPredicted RBP23.65■■□□□ 1.38
COL9A2-205ENST00000461118 CDHR2Q9BYE9 1310 aa23.64■■□□□ 1.38
COL9A2-205ENST00000461118 MAP2K2P36507 400 aa23.64■■□□□ 1.37
COL9A2-205ENST00000461118 CIAPIN1Q6FI81 312 aa23.64■■□□□ 1.37
COL9A2-205ENST00000461118 MPNDQ8N594 471 aa23.64■■□□□ 1.37
COL9A2-205ENST00000461118 STK31Q9BXU1 1019 aa23.64■■□□□ 1.37
COL9A2-205ENST00000461118 MYH16Q9H6N6 1097 aa23.64■■□□□ 1.37
COL9A2-205ENST00000461118 SHTN1A0MZ66 631 aa23.63■■□□□ 1.37
COL9A2-205ENST00000461118 RAD17O75943 681 aa23.63■■□□□ 1.37
COL9A2-205ENST00000461118 CELF2O95319 508 aaKnown RBP23.63■■□□□ 1.37
COL9A2-205ENST00000461118 RIC3Q7Z5B4 369 aa23.63■■□□□ 1.37
COL9A2-205ENST00000461118 HHIPL1Q96JK4 782 aa23.63■■□□□ 1.37
COL9A2-205ENST00000461118 TMX4Q9H1E5 349 aaPredicted RBP23.63■■□□□ 1.37
COL9A2-205ENST00000461118 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
COL9A2-205ENST00000461118 TSKSQ9UJT2 592 aa23.63■■□□□ 1.37
COL9A2-205ENST00000461118 VAMP4O75379 141 aa23.62■■□□□ 1.37
COL9A2-205ENST00000461118 GRAPQ13588 217 aa23.62■■□□□ 1.37
COL9A2-205ENST00000461118 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
COL9A2-205ENST00000461118 TRPM4Q8TD43 1214 aa23.62■■□□□ 1.37
COL9A2-205ENST00000461118 SH3TC1Q8TE82 1336 aa23.61■■□□□ 1.37
COL9A2-205ENST00000461118 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
COL9A2-205ENST00000461118 EXOSC9Q06265 439 aaKnown RBP23.61■■□□□ 1.37
COL9A2-205ENST00000461118 ZC3H15Q8WU90 426 aaKnown RBP23.61■■□□□ 1.37
COL9A2-205ENST00000461118 SCN9AQ15858 1988 aa23.6■■□□□ 1.37
COL9A2-205ENST00000461118 ATP5J2-PTCD1G3V325 749 aa23.6■■□□□ 1.37
COL9A2-205ENST00000461118 SLC4A2P04920 1241 aa23.6■■□□□ 1.37
COL9A2-205ENST00000461118 FAM161AQ3B820 660 aa23.6■■□□□ 1.37
COL9A2-205ENST00000461118 BEGAINQ9BUH8 593 aa23.6■■□□□ 1.37
COL9A2-205ENST00000461118 TNIP1Q15025 636 aa23.59■■□□□ 1.37
COL9A2-205ENST00000461118 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
COL9A2-205ENST00000461118 CNOT7Q9UIV1 285 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms