RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 SLC51AQ86UW1 340 aa15.35■□□□□ 0.05
ERGIC3-211ENST00000461043 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
ERGIC3-211ENST00000461043 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
ERGIC3-211ENST00000461043 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
ERGIC3-211ENST00000461043 FER1L6Q2WGJ9 1857 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 BBOX1O75936 387 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 CSF1RP07333 972 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 FOXO4P98177 505 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 CCDC152Q4G0S7 254 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 SOGA3Q5TF21 947 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 INTS3Q68E01 1043 aaKnown RBP15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 OLFM4Q6UX06 510 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 ARHGAP27Q6ZUM4 889 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 KAZALD1Q96I82 304 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 USP44Q9H0E7 712 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
ERGIC3-211ENST00000461043 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 NBPF7P0C2Y1 421 aaPredicted RBP15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 PRELPP51888 382 aa15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 LRRC37AA6NMS7 1700 aa15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 LTBP3Q9NS15 1303 aa15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 MYH3P11055 1940 aa15.33■□□□□ 0.04
ERGIC3-211ENST00000461043 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 TMC4Q7Z404 712 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 GREM2Q9H772 168 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 SEC31BQ9NQW1 1179 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 ATP6V0A2Q9Y487 856 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 CHD4Q14839 1912 aa15.32■□□□□ 0.04
ERGIC3-211ENST00000461043 TAF1P21675 1872 aa15.31■□□□□ 0.04
ERGIC3-211ENST00000461043 RASSF7Q02833 373 aa15.31■□□□□ 0.04
ERGIC3-211ENST00000461043 SUCLG2Q96I99 432 aa15.31■□□□□ 0.04
ERGIC3-211ENST00000461043 RABL6Q3YEC7 729 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-211ENST00000461043 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
ERGIC3-211ENST00000461043 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
ERGIC3-211ENST00000461043 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
ERGIC3-211ENST00000461043 CCDC85AQ96PX6 553 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-211ENST00000461043 LTBP1Q14766 1721 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 RLBP1P12271 317 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 RPS8P62241 208 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 PSMD1Q99460 953 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 SBF1O95248 1867 aa15.29■□□□□ 0.04
ERGIC3-211ENST00000461043 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 LMNB1P20700 586 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 LMBR1LQ6UX01 489 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 TMEM57Q8N5G2 664 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 CLUAP1Q96AJ1 413 aa15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 RTFDC1Q9BY42 306 aaPredicted RBP15.28■□□□□ 0.04
ERGIC3-211ENST00000461043 ITGA6P23229 1130 aa15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 DZIP1LQ8IYY4 767 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 MEIS3Q99687 375 aa15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 BICC1Q9H694 974 aaKnown RBP15.27■□□□□ 0.04
ERGIC3-211ENST00000461043 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
ERGIC3-211ENST00000461043 BSDC1Q9NW68 430 aaPredicted RBP15.26■□□□□ 0.03
ERGIC3-211ENST00000461043 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 YY1P25490 414 aa15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 RNF181Q9P0P0 153 aa15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 COL4A5P29400 1685 aa15.25■□□□□ 0.03
ERGIC3-211ENST00000461043 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 GNAI3P08754 354 aa15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 GPSM2P81274 684 aa15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 MPNDQ8N594 471 aa15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 ZNF277Q9NRM2 450 aaPredicted RBP15.24■□□□□ 0.03
ERGIC3-211ENST00000461043 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 IARSP41252 1262 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 PANK1Q8TE04 598 aa15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 TMX4Q9H1E5 349 aaPredicted RBP15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 MINPP1Q9UNW1 487 aa15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
ERGIC3-211ENST00000461043 PLIN1O60240 522 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 MS4A1P11836 297 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 IGHMBP2P38935 993 aaKnown RBP15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 RFX5P48382 616 aaPredicted RBP15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 CCDC57Q2TAC2 916 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 CHMP3Q9Y3E7 222 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 SPEF2Q9C093 1822 aa15.22■□□□□ 0.03
ERGIC3-211ENST00000461043 ZBTB7BO15156 539 aaPredicted RBP15.21■□□□□ 0.03
ERGIC3-211ENST00000461043 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
ERGIC3-211ENST00000461043 TBC1D16Q8TBP0 767 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms