RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 BBOX1O75936 387 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 VEGFBP49765 207 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-207ENST00000460886 SP8Q8IXZ3 490 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 PRDM10Q9NQV6 1147 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
COL6A2-207ENST00000460886 TAF1P21675 1872 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 FANCIQ9NVI1 1328 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 FOXN1O15353 648 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
COL6A2-207ENST00000460886 EPS15P42566 896 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 HDGFL1Q5TGJ6 251 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 TSPYL6Q8N831 410 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 SUPT20HQ8NEM7 779 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 GJA3Q9Y6H8 435 aa12.19□□□□□ -0.46
COL6A2-207ENST00000460886 PPIP5K2O43314 1243 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
COL6A2-207ENST00000460886 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 AOC3Q16853 763 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 ZNRF3Q9ULT6 936 aa12.18□□□□□ -0.46
COL6A2-207ENST00000460886 HCLS1P14317 486 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-207ENST00000460886 CXCL9Q07325 125 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 GRAPQ13588 217 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 DEFB115Q30KQ5 88 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 PLBD2Q8NHP8 589 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 GRAPLQ8TC17 118 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-207ENST00000460886 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
COL6A2-207ENST00000460886 ADARB2Q9NS39 739 aaKnown RBP12.17□□□□□ -0.46
COL6A2-207ENST00000460886 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 PGAP2Q9UHJ9 254 aa12.17□□□□□ -0.46
COL6A2-207ENST00000460886 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
COL6A2-207ENST00000460886 E9PSI1 815 aa12.16□□□□□ -0.46
COL6A2-207ENST00000460886 TCERG1O14776 1098 aaKnown RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 TWISTNBQ3B726 338 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
COL6A2-207ENST00000460886 DBF4Q9UBU7 674 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-207ENST00000460886 WDR33Q9C0J8 1336 aaKnown RBP12.15□□□□□ -0.46
COL6A2-207ENST00000460886 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 SF3B3Q15393 1217 aaKnown RBP12.15□□□□□ -0.46
COL6A2-207ENST00000460886 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 CST9Q5W186 159 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 MPNDQ8N594 471 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 COL4A1P02462 1669 aa12.15□□□□□ -0.46
COL6A2-207ENST00000460886 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
COL6A2-207ENST00000460886 CIAPIN1Q6FI81 312 aa12.14□□□□□ -0.47
COL6A2-207ENST00000460886 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
COL6A2-207ENST00000460886 AIDAQ96BJ3 306 aa12.14□□□□□ -0.47
COL6A2-207ENST00000460886 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
COL6A2-207ENST00000460886 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
COL6A2-207ENST00000460886 YDJCA8MPS7 323 aa12.13□□□□□ -0.47
COL6A2-207ENST00000460886 VAMP4O75379 141 aa12.13□□□□□ -0.47
COL6A2-207ENST00000460886 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
COL6A2-207ENST00000460886 TNIP1Q15025 636 aa12.13□□□□□ -0.47
COL6A2-207ENST00000460886 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
COL6A2-207ENST00000460886 ABT1Q9ULW3 272 aaKnown RBP12.13□□□□□ -0.47
COL6A2-207ENST00000460886 TLL2Q9Y6L7 1015 aa12.13□□□□□ -0.47
COL6A2-207ENST00000460886 TRAF5O00463 557 aa12.12□□□□□ -0.47
COL6A2-207ENST00000460886 CAPN15O75808 1086 aa12.12□□□□□ -0.47
COL6A2-207ENST00000460886 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
COL6A2-207ENST00000460886 ECE1P42892 770 aa12.12□□□□□ -0.47
COL6A2-207ENST00000460886 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL6A2-207ENST00000460886 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
COL6A2-207ENST00000460886 LBX1P52954 281 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
COL6A2-207ENST00000460886 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
COL6A2-207ENST00000460886 DPF2Q92785 391 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
COL6A2-207ENST00000460886 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 CAPNS2Q96L46 248 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
COL6A2-207ENST00000460886 PSME4Q14997 1843 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 ZNF609O15014 1411 aa12.11□□□□□ -0.47
COL6A2-207ENST00000460886 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 RAD17O75943 681 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 MAP2K2P36507 400 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
COL6A2-207ENST00000460886 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
COL6A2-207ENST00000460886 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
COL6A2-207ENST00000460886 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms