RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MAPK8P45983 427 aa8.18□□□□□ -1.1
VBP1-202ENST00000460509 TBC1D8BQ0IIM8 1120 aa8.18□□□□□ -1.1
VBP1-202ENST00000460509 TTC39BQ5VTQ0 682 aaPredicted RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
VBP1-202ENST00000460509 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
VBP1-202ENST00000460509 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
VBP1-202ENST00000460509 EGFRP00533 1210 aa8.17□□□□□ -1.1
VBP1-202ENST00000460509 GAS6Q14393 721 aa8.17□□□□□ -1.1
VBP1-202ENST00000460509 FOXD3Q9UJU5 478 aaPredicted RBP8.17□□□□□ -1.1
VBP1-202ENST00000460509 C2CD2LO14523 706 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 NEFLP07196 543 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 VSIG8P0DPA2 414 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 ERCC3P19447 782 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
VBP1-202ENST00000460509 ORC1Q13415 861 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
VBP1-202ENST00000460509 ABI2Q9NYB9 513 aaPredicted RBP8.16□□□□□ -1.1
VBP1-202ENST00000460509 FAM181BA6NEQ2 426 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 TREHO43280 583 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 PHACTR2O75167 634 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 RNFT1Q5M7Z0 435 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 XKR5Q6UX68 686 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 SYT9Q86SS6 491 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 CNTNAP3BQ96NU0 1288 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 CNTNAP3Q9BZ76 1288 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 ZFATQ9P243 1243 aa8.15□□□□□ -1.1
VBP1-202ENST00000460509 MMP20O60882 483 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
VBP1-202ENST00000460509 NPAS4Q8IUM7 802 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 C1orf127Q8N9H9 656 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 CNTN3Q9P232 1028 aa8.14□□□□□ -1.11
VBP1-202ENST00000460509 IGF1RP08069 1367 aa8.13□□□□□ -1.11
VBP1-202ENST00000460509 PHF20L1A8MW92 1017 aa8.13□□□□□ -1.11
VBP1-202ENST00000460509 IGHA2P01877 340 aa8.13□□□□□ -1.11
VBP1-202ENST00000460509 P4HBP07237 508 aaKnown RBP8.13□□□□□ -1.11
VBP1-202ENST00000460509 PSAPP07602 524 aa8.13□□□□□ -1.11
VBP1-202ENST00000460509 CES1P23141 567 aa8.13□□□□□ -1.11
VBP1-202ENST00000460509 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
VBP1-202ENST00000460509 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
VBP1-202ENST00000460509 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 CPNE3O75131 537 aaKnown RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 MAP2K3P46734 347 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 MLLT1Q03111 559 aaPredicted RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 DSC3Q14574 896 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
VBP1-202ENST00000460509 CSRNP1Q96S65 589 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 EFCC1Q9HA90 598 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
VBP1-202ENST00000460509 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 EREGO14944 169 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 ATP2B2Q01814 1243 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 USPL1Q5W0Q7 1092 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 GIPC2Q8TF65 315 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 NSUN5Q96P11 429 aaKnown RBP8.11□□□□□ -1.11
VBP1-202ENST00000460509 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
VBP1-202ENST00000460509 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
VBP1-202ENST00000460509 LDHBP07195 334 aaKnown RBP8.1□□□□□ -1.11
VBP1-202ENST00000460509 KRT76Q01546 638 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 PLAURQ03405 335 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.11
VBP1-202ENST00000460509 HFE2Q6ZVN8 426 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 GGA1Q9UJY5 639 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 AMOTL2Q9Y2J4 779 aa8.1□□□□□ -1.11
VBP1-202ENST00000460509 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 ARAFP10398 606 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 ADH6P28332 368 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
VBP1-202ENST00000460509 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
VBP1-202ENST00000460509 NCAPG2Q86XI2 1143 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 OR13H1Q8NG92 308 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 SETDB2Q96T68 719 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
VBP1-202ENST00000460509 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
VBP1-202ENST00000460509 SIN3BO75182 1162 aa8.08□□□□□ -1.12
VBP1-202ENST00000460509 HYAL2Q12891 473 aa8.08□□□□□ -1.12
VBP1-202ENST00000460509 ENOX2Q16206 610 aaKnown RBP8.08□□□□□ -1.12
VBP1-202ENST00000460509 ZNF326Q5BKZ1 582 aaKnown RBP8.08□□□□□ -1.12
VBP1-202ENST00000460509 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
VBP1-202ENST00000460509 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
VBP1-202ENST00000460509 KLF15Q9UIH9 416 aa8.08□□□□□ -1.12
VBP1-202ENST00000460509 J3QW42 95 aa8.07□□□□□ -1.12
VBP1-202ENST00000460509 CPB1P15086 417 aa8.07□□□□□ -1.12
VBP1-202ENST00000460509 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms